ID D8T2P8_SELML Unreviewed; 941 AA.
AC D8T2P8;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 27-MAR-2024, entry version 55.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=SELMODRAFT_130453 {ECO:0000313|EMBL:EFJ09088.1};
OS Selaginella moellendorffii (Spikemoss).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN [1] {ECO:0000313|EMBL:EFJ09088.1, ECO:0000313|Proteomes:UP000001514}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21551031; DOI=10.1126/science.1203810;
RA Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT "The Selaginella genome identifies genetic changes associated with the
RT evolution of vascular plants.";
RL Science 332:960-963(2011).
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DR EMBL; GL377666; EFJ09088.1; -; Genomic_DNA.
DR RefSeq; XP_002989821.1; XM_002989775.1.
DR AlphaFoldDB; D8T2P8; -.
DR EnsemblPlants; EFJ09088; EFJ09088; SELMODRAFT_130453.
DR GeneID; 9629011; -.
DR Gramene; EFJ09088; EFJ09088; SELMODRAFT_130453.
DR KEGG; smo:SELMODRAFT_130453; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_15_1_1; -.
DR InParanoid; D8T2P8; -.
DR OrthoDB; 340213at2759; -.
DR Proteomes; UP000001514; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 6.
DR PANTHER; PTHR24015:SF1672; OS06G0506100 PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 6.
DR Pfam; PF13041; PPR_2; 4.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 8.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001514};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 22..56
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 123..157
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 158..192
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 224..258
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 325..359
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 427..461
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 529..565
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 633..667
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 849..941
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 941 AA; 103198 MW; BCC938842ED94389 CRC64;
MYGKCARVTD ALMVFDGISA KNVFSWTMMM AAYSQNGHYR EALELFTRMQ WEGTRPDKVV
FVIALDACAA SGELDHGRQI HSSVVGSGLT SNIIISNSLV NMYGKCQDVP CAEKVFDGML
LRDVVSWTAM LAVYAQNGCW SQALECLSRM DAEGVKPNQV TFVTIVDVCA KLRLLDLGRK
IHHRIINEGL EPDGILGNAL VHMYGSCGSF DDMKSVFSRM GQSSVLLWTT MIAGCSQNGQ
YEEGLLVFRK MDLEGVKANE VTYMSMVEVC RNLDAVKEGE MIDARILESP FCSSTLLATS
LISLYGQCGI LDRAKGLLEH MYQRDVVAWN AMVTACAQNG DNWEAIHLLR RMDMEGFGAN
KVTYLSVLEA CANLEALSQG REIHARVLLC GLLQREVAVG NSVITMYGKC GQTEAAMSVF
EAMPRKDDVS WNAVINASVG NSKFQDALEL FHGMELEGLR SNEFTLLSLL EACGGLEDLK
LARQIHARAA AGGFGGNSTA VGNSVVNMYA RCGSLLDAKK AFDSLEEKGL VAWSIILAAY
AQSKDGPGRR AFKFFQEMEA EGIKPGEVTF VSALDACAAM ATLEHGRSMH RRAAASGFVE
TSLVLGNTII NMYGKCGSPS DAKLVFDQMP EKCLISWNSL IVAYAHNGHA LEALSSLQEM
LLQGFDPDSG TSVSILYGLS HAGLLERGVE HFRSSIQDHG LEPSSGQLKC LVDLLARKGF
LDAAEELILA SPACQADTIA WMTLLAACKS YGDPQRGIRC AERVFELEPQ HSGSFVVLAN
LYASVGRWSD ASRIRKMMER MSVKKEPGCS WIELSGSVHE FISGESKHPK IREICEDLEK
LTLRMREAGY VPDTTNVVHD VEEGDKEEIL SRHSERLAIV FGLMSTRPGE TIRVVKNLRV
CSDCHAATKI ISSVVGREIV VRDSSRFHHF KHGQCSCGDF W
//
