ID D8T9E0_SELML Unreviewed; 964 AA.
AC D8T9E0;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 27-MAR-2024, entry version 54.
DE RecName: Full=CCHC-type domain-containing protein {ECO:0000259|PROSITE:PS50158};
GN ORFNames=SELMODRAFT_448689 {ECO:0000313|EMBL:EFJ06691.1};
OS Selaginella moellendorffii (Spikemoss).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella.
OX NCBI_TaxID=88036 {ECO:0000313|Proteomes:UP000001514};
RN [1] {ECO:0000313|EMBL:EFJ06691.1, ECO:0000313|Proteomes:UP000001514}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21551031; DOI=10.1126/science.1203810;
RA Banks J.A., Nishiyama T., Hasebe M., Bowman J.L., Gribskov M.,
RA dePamphilis C., Albert V.A., Aono N., Aoyama T., Ambrose B.A., Ashton N.W.,
RA Axtell M.J., Barker E., Barker M.S., Bennetzen J.L., Bonawitz N.D.,
RA Chapple C., Cheng C., Correa L.G., Dacre M., DeBarry J., Dreyer I.,
RA Elias M., Engstrom E.M., Estelle M., Feng L., Finet C., Floyd S.K.,
RA Frommer W.B., Fujita T., Gramzow L., Gutensohn M., Harholt J., Hattori M.,
RA Heyl A., Hirai T., Hiwatashi Y., Ishikawa M., Iwata M., Karol K.G.,
RA Koehler B., Kolukisaoglu U., Kubo M., Kurata T., Lalonde S., Li K., Li Y.,
RA Litt A., Lyons E., Manning G., Maruyama T., Michael T.P., Mikami K.,
RA Miyazaki S., Morinaga S., Murata T., Mueller-Roeber B., Nelson D.R.,
RA Obara M., Oguri Y., Olmstead R.G., Onodera N., Petersen B.L., Pils B.,
RA Prigge M., Rensing S.A., Riano-Pachon D.M., Roberts A.W., Sato Y.,
RA Scheller H.V., Schulz B., Schulz C., Shakirov E.V., Shibagaki N.,
RA Shinohara N., Shippen D.E., Soerensen I., Sotooka R., Sugimoto N.,
RA Sugita M., Sumikawa N., Tanurdzic M., Theissen G., Ulvskov P., Wakazuki S.,
RA Weng J.K., Willats W.W., Wipf D., Wolf P.G., Yang L., Zimmer A.D., Zhu Q.,
RA Mitros T., Hellsten U., Loque D., Otillar R., Salamov A., Schmutz J.,
RA Shapiro H., Lindquist E., Lucas S., Rokhsar D., Grigoriev I.V.;
RT "The Selaginella genome identifies genetic changes associated with the
RT evolution of vascular plants.";
RL Science 332:960-963(2011).
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DR EMBL; GL377695; EFJ06691.1; -; Genomic_DNA.
DR RefSeq; XP_002992194.1; XM_002992148.1.
DR AlphaFoldDB; D8T9E0; -.
DR EnsemblPlants; EFJ06691; EFJ06691; SELMODRAFT_448689.
DR Gramene; EFJ06691; EFJ06691; SELMODRAFT_448689.
DR KEGG; smo:SELMODRAFT_448689; -.
DR eggNOG; ENOG502RF6R; Eukaryota.
DR HOGENOM; CLU_351048_0_0_1; -.
DR InParanoid; D8T9E0; -.
DR Proteomes; UP000001514; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd00105; KH-I; 1.
DR Gene3D; 3.30.1370.10; K Homology domain, type 1; 1.
DR InterPro; IPR004087; KH_dom.
DR InterPro; IPR004088; KH_dom_type_1.
DR InterPro; IPR036612; KH_dom_type_1_sf.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR PANTHER; PTHR34210:SF3; CCHC-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR34210; OS01G0252900 PROTEIN; 1.
DR Pfam; PF00013; KH_1; 1.
DR SMART; SM00322; KH; 1.
DR SUPFAM; SSF54791; Eukaryotic type KH-domain (KH-domain type I); 1.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR PROSITE; PS50084; KH_TYPE_1; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Reference proteome {ECO:0000313|Proteomes:UP000001514};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00117};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 93..107
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT REGION 1..67
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 30..45
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 964 AA; 108987 MW; 6D79E203CBDEE86C CRC64;
MAEDDPDRDE EWFNEVYGKE YTGPLSRARQ PQEPERKKPA AAQVETSDEE EEGPRDPNAV
PTDFTSREAK VWEAKAKAIE RNWKRRKEEE LHCKICGEAG HFAQGCPTTL GGSRKSGEIV
ERVTLKDKRI KPRLIGTGGS VIQGIEKDTG CRLKLVDNQG DGHGVFFVRV SGPDRLAVSK
AVNAVKKVTE QFDSEWSQNS RGRNAKGSNS LAGGQLEHVQ RLQQHPSNGG ALQAEDLEWG
NLQVQVQVQG RSAKAPRDEY FRSRSLENGP YCSARLYEQE VKSPETLDEL EQCFLQEAME
LSKEQSAEED RELARHRECL RGIQEQYQQK MMNLRTKQSR RRDEFLHHEI HIRQQYYQQS
PAGYLPDGAQ KIVEGQLEQP NDPEKEEQLR KLHMLWTPSK GIYITETDFT RWCDTYISLK
RSAVAQLAID ESGDRPIVGF GGGSKDVHRV ANWVQSHFPG GESNIAPEDP VMRCGVGALI
LARLTWLKLL KECKPGLVPR DWAFFQLEYP AVDDVFLHLV EELLALVRDV HQAPSLANNF
HFGIQKLLHE VGWGYGIVVL DEAQALLKCS RTPQEGQSLL NSIVFALRSY GKCMLTFRQI
LYSGRFAKQS YMREIYSLPG FDGSNIQAFM ERFIDVSRLD MLAVISTYTG RRRLLSTAIE
KYIMETAPAA DWFMEFARRM ITETGRELGV HRSLRDDAVL LWNDPEMASF IEDLIFTYYL
SGAGHVIVPG RRRGMTLVDC GFATLLESSN GAEPFAPILP YIRGVTDNEV QAPGSSVTTE
ICYIILREPL VVDALWYHMP QGTFMGSFMN TFKNPSIRKI NFKTYVCTTL GSVFEKKVPA
EVLGLVETHA MYKETYELLK PKELSAMLVQ EIGNAEQLNN WLQSVETGLS FATYAHTGPF
CKAGPEAVFF LWNGKLNKKM PVFVQFKTGS ELGATQAFAT LDIMKLDNKL HRQNLKQVGE
LVNG
//
