ID D8TLN4_VOLCA Unreviewed; 502 AA.
AC D8TLN4;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE SubName: Full=Splicing factor 3a, subunit 3 {ECO:0000313|EMBL:EFJ51494.1};
GN Name=spl3 {ECO:0000313|EMBL:EFJ51494.1};
GN ORFNames=VOLCADRAFT_79604 {ECO:0000313|EMBL:EFJ51494.1};
OS Volvox carteri f. nagariensis.
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae;
OC CS clade; Chlamydomonadales; Volvocaceae; Volvox.
OX NCBI_TaxID=3068 {ECO:0000313|Proteomes:UP000001058};
RN [1] {ECO:0000313|EMBL:EFJ51494.1, ECO:0000313|Proteomes:UP000001058}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=f. Nagariensis / Eve {ECO:0000313|Proteomes:UP000001058};
RX PubMed=20616280; DOI=10.1126/science.1188800;
RA Prochnik S.E., Umen J., Nedelcu A.M., Hallmann A., Miller S.M., Nishii I.,
RA Ferris P., Kuo A., Mitros T., Fritz-Laylin L.K., Hellsten U., Chapman J.,
RA Simakov O., Rensing S.A., Terry A., Pangilinan J., Kapitonov V., Jurka J.,
RA Salamov A., Shapiro H., Schmutz J., Grimwood J., Lindquist E., Lucas S.,
RA Grigoriev I.V., Schmitt R., Kirk D., Rokhsar D.S.;
RT "Genomic analysis of organismal complexity in the multicellular green alga
RT Volvox carteri.";
RL Science 329:223-226(2010).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; GL378327; EFJ51494.1; -; Genomic_DNA.
DR RefSeq; XP_002947446.1; XM_002947400.1.
DR AlphaFoldDB; D8TLN4; -.
DR STRING; 3068.D8TLN4; -.
DR GeneID; 9620409; -.
DR KEGG; vcn:VOLCADRAFT_79604; -.
DR eggNOG; KOG2636; Eukaryota.
DR InParanoid; D8TLN4; -.
DR OrthoDB; 5483967at2759; -.
DR Proteomes; UP000001058; Unassembled WGS sequence.
DR GO; GO:0005681; C:spliceosomal complex; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR InterPro; IPR025086; SDE2-like_C_dom.
DR InterPro; IPR031774; SF3A3_dom.
DR InterPro; IPR024598; SF3a60/Prp9_C.
DR InterPro; IPR021966; SF3a60_bindingd.
DR PANTHER; PTHR12786:SF2; SPLICING FACTOR 3A SUBUNIT 3; 1.
DR PANTHER; PTHR12786; SPLICING FACTOR SF3A-RELATED; 1.
DR Pfam; PF13297; SDE2_2C; 1.
DR Pfam; PF16837; SF3A3; 1.
DR Pfam; PF12108; SF3a60_bindingd; 1.
DR Pfam; PF11931; SF3a60_Prp9_C; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000001058}.
FT DOMAIN 82..100
FT /note="Splicing factor SF3a60 binding"
FT /evidence="ECO:0000259|Pfam:PF12108"
FT DOMAIN 123..174
FT /note="SF3A3"
FT /evidence="ECO:0000259|Pfam:PF16837"
FT DOMAIN 222..300
FT /note="SDE2-like C-terminal"
FT /evidence="ECO:0000259|Pfam:PF13297"
FT DOMAIN 386..502
FT /note="Splicing factor SF3a60 /Prp9 subunit C-terminal"
FT /evidence="ECO:0000259|Pfam:PF11931"
FT COILED 348..375
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 502 AA; 58261 MW; F0605CD8BE23AEBC CRC64;
MAETLLEQTR SLHEDVERFE RIIVKDLKQE TKSHKDKIMQ SHRVRKRLDQ IQDAARKLLK
IYEDEDKARK EEIEALGGED KIFSKFYDRL KEIREYHRKF LSNDLTEAED DTLLLKEEPH
VDFTGEEGLG RYLDMHDLYL RFLNLQSLQQ RSKGEYYEYL TSFSDFSAMP RQQKMGKQYS
EYLAALLGYL CSFYERTQPL AQLQRMLNTV EKDFSARWEQ GQIAGWEDRG VGNVAPSTSG
IELEAFSSAE ELEILGADRL KEALTSLGLK CGGTTKERAA RLWLTRDTPL SQLDRKHFAK
GVVPPSDSDV ATNSKAAHAR HVALLEVEIR KMAELLVNVI ADTKGKVEKK QAQTYEEMQA
ELAEAEAEVA APEDDEEDEF VYNPLKLPLG WDGKPIPYWL YKLHGLNQEF KCEICGNYSY
WGRRAYEKHF KEYRHLNGMR ALGIPNNKMF YEVTKIEDAL QLWKSIQKAK GDFKPEDEEF
EDAQGNVYSK KTYDDLKRQG LI
//
