ID D8TW12_VOLCA Unreviewed; 838 AA.
AC D8TW12;
DT 05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2010, sequence version 1.
DT 24-JAN-2024, entry version 47.
DE RecName: Full=OB domain-containing protein {ECO:0000259|Pfam:PF01336};
DE Flags: Fragment;
GN ORFNames=VOLCADRAFT_117616 {ECO:0000313|EMBL:EFJ48398.1};
OS Volvox carteri f. nagariensis.
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae;
OC CS clade; Chlamydomonadales; Volvocaceae; Volvox.
OX NCBI_TaxID=3068 {ECO:0000313|Proteomes:UP000001058};
RN [1] {ECO:0000313|EMBL:EFJ48398.1, ECO:0000313|Proteomes:UP000001058}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=f. Nagariensis / Eve {ECO:0000313|Proteomes:UP000001058};
RX PubMed=20616280; DOI=10.1126/science.1188800;
RA Prochnik S.E., Umen J., Nedelcu A.M., Hallmann A., Miller S.M., Nishii I.,
RA Ferris P., Kuo A., Mitros T., Fritz-Laylin L.K., Hellsten U., Chapman J.,
RA Simakov O., Rensing S.A., Terry A., Pangilinan J., Kapitonov V., Jurka J.,
RA Salamov A., Shapiro H., Schmutz J., Grimwood J., Lindquist E., Lucas S.,
RA Grigoriev I.V., Schmitt R., Kirk D., Rokhsar D.S.;
RT "Genomic analysis of organismal complexity in the multicellular green alga
RT Volvox carteri.";
RL Science 329:223-226(2010).
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DR EMBL; GL378340; EFJ48398.1; -; Genomic_DNA.
DR RefSeq; XP_002950652.1; XM_002950606.1.
DR AlphaFoldDB; D8TW12; -.
DR STRING; 3068.D8TW12; -.
DR GeneID; 9617847; -.
DR KEGG; vcn:VOLCADRAFT_117616; -.
DR eggNOG; KOG3108; Eukaryota.
DR InParanoid; D8TW12; -.
DR OrthoDB; 72010at2759; -.
DR Proteomes; UP000001058; Unassembled WGS sequence.
DR GO; GO:0005672; C:transcription factor TFIIA complex; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006367; P:transcription initiation at RNA polymerase II promoter; IEA:InterPro.
DR CDD; cd04478; RPA2_DBD_D; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR004365; NA-bd_OB_tRNA.
DR InterPro; IPR040260; RFA2-like.
DR InterPro; IPR004855; TFIIA_asu/bsu.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR13989:SF16; REPLICATION PROTEIN A 32 KDA SUBUNIT; 1.
DR PANTHER; PTHR13989; REPLICATION PROTEIN A-RELATED; 1.
DR Pfam; PF01336; tRNA_anti-codon; 1.
DR SMART; SM01371; TFIIA; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001058}.
FT DOMAIN 156..230
FT /note="OB"
FT /evidence="ECO:0000259|Pfam:PF01336"
FT REGION 556..751
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 561..635
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 636..656
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 662..717
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 726..745
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EFJ48398.1"
SQ SEQUENCE 838 AA; 88985 MW; 4A4B9EBDF6785E21 CRC64;
GRALGGRARV PTAVEAAAAA ALRAARSRSR RAIRSPICSP AAKFKGVEAL LKSPSGSQVV
PSKVASDAEG MDVSARVSAA IAPSVFGKDG DAQQRHAVGT LSASDVISLS TVACGLSTGR
NQHNSLRAFT IRHLLKEIVN ADDERYMADG HDISTVTVVG KVTAYQEGPT RVILQVYDGT
ASIEVCSWVD DMDAQAQKRV DWQVGRYVRV YGNLKTFERK RSITAFAVKP ITDHNEVTYH
FLQSIMQHLH LTKGAPPAGQ STGGAMPAGG RTPGGGSLYG GMSGAGGGGY GGMAQAGYGG
GAAAASGLPG GDIAMDLKHV YNQQRALSST HGLGIEEALQ ELRNMGRNYN LQQVAQACEV
LAAEGVLYST INDTTYKSCC CVAIMRPMVP VPKAAVMRSS QRALLALLLA ASLAAPTLAA
RPSALLINTD DGLTRPDDCL DDDDCRRSEV CVNGGCLAVK DDGESCRQDE ECRSGTCRRS
WWPTGSVCVT PCSADEDCPS RAPFCNTSPY MSRVPGGSRS SDGGAATAAA MAVLTRPIST
TALGDAAAAG GVAADEGIAL KRDDEDDEDD DEDEDDEDDD DDEDDDDDDD DDDDDDDDDD
DDDDDDDDDD DDGDDDDDDD DDEDEDEDED DGDEEGDGHY KGHGRHEVER HEDHHGHRGW
KARRAALAEG PTDDAEDSAG KDGDDPHADG GHDQDQDHDH DHDHDHDHDH DHDGPQPGDA
ASDVISTAGV ETQTSTSTST REARSGGKET NGRCVQCMED KDCVEGYYCD RGFRKTAHSC
VELGKECSSY GDCSMGEYCD SSSKHCKPYF LGGMVKRLGK IATIEAESVA VSAREARL
//