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Database: UniProt
Entry: D8TW12_VOLCA
LinkDB: D8TW12_VOLCA
Original site: D8TW12_VOLCA 
ID   D8TW12_VOLCA            Unreviewed;       838 AA.
AC   D8TW12;
DT   05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT   05-OCT-2010, sequence version 1.
DT   24-JAN-2024, entry version 47.
DE   RecName: Full=OB domain-containing protein {ECO:0000259|Pfam:PF01336};
DE   Flags: Fragment;
GN   ORFNames=VOLCADRAFT_117616 {ECO:0000313|EMBL:EFJ48398.1};
OS   Volvox carteri f. nagariensis.
OC   Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae;
OC   CS clade; Chlamydomonadales; Volvocaceae; Volvox.
OX   NCBI_TaxID=3068 {ECO:0000313|Proteomes:UP000001058};
RN   [1] {ECO:0000313|EMBL:EFJ48398.1, ECO:0000313|Proteomes:UP000001058}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=f. Nagariensis / Eve {ECO:0000313|Proteomes:UP000001058};
RX   PubMed=20616280; DOI=10.1126/science.1188800;
RA   Prochnik S.E., Umen J., Nedelcu A.M., Hallmann A., Miller S.M., Nishii I.,
RA   Ferris P., Kuo A., Mitros T., Fritz-Laylin L.K., Hellsten U., Chapman J.,
RA   Simakov O., Rensing S.A., Terry A., Pangilinan J., Kapitonov V., Jurka J.,
RA   Salamov A., Shapiro H., Schmutz J., Grimwood J., Lindquist E., Lucas S.,
RA   Grigoriev I.V., Schmitt R., Kirk D., Rokhsar D.S.;
RT   "Genomic analysis of organismal complexity in the multicellular green alga
RT   Volvox carteri.";
RL   Science 329:223-226(2010).
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DR   EMBL; GL378340; EFJ48398.1; -; Genomic_DNA.
DR   RefSeq; XP_002950652.1; XM_002950606.1.
DR   AlphaFoldDB; D8TW12; -.
DR   STRING; 3068.D8TW12; -.
DR   GeneID; 9617847; -.
DR   KEGG; vcn:VOLCADRAFT_117616; -.
DR   eggNOG; KOG3108; Eukaryota.
DR   InParanoid; D8TW12; -.
DR   OrthoDB; 72010at2759; -.
DR   Proteomes; UP000001058; Unassembled WGS sequence.
DR   GO; GO:0005672; C:transcription factor TFIIA complex; IEA:InterPro.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0006367; P:transcription initiation at RNA polymerase II promoter; IEA:InterPro.
DR   CDD; cd04478; RPA2_DBD_D; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR004365; NA-bd_OB_tRNA.
DR   InterPro; IPR040260; RFA2-like.
DR   InterPro; IPR004855; TFIIA_asu/bsu.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   PANTHER; PTHR13989:SF16; REPLICATION PROTEIN A 32 KDA SUBUNIT; 1.
DR   PANTHER; PTHR13989; REPLICATION PROTEIN A-RELATED; 1.
DR   Pfam; PF01336; tRNA_anti-codon; 1.
DR   SMART; SM01371; TFIIA; 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000001058}.
FT   DOMAIN          156..230
FT                   /note="OB"
FT                   /evidence="ECO:0000259|Pfam:PF01336"
FT   REGION          556..751
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        561..635
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        636..656
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        662..717
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        726..745
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:EFJ48398.1"
SQ   SEQUENCE   838 AA;  88985 MW;  4A4B9EBDF6785E21 CRC64;
     GRALGGRARV PTAVEAAAAA ALRAARSRSR RAIRSPICSP AAKFKGVEAL LKSPSGSQVV
     PSKVASDAEG MDVSARVSAA IAPSVFGKDG DAQQRHAVGT LSASDVISLS TVACGLSTGR
     NQHNSLRAFT IRHLLKEIVN ADDERYMADG HDISTVTVVG KVTAYQEGPT RVILQVYDGT
     ASIEVCSWVD DMDAQAQKRV DWQVGRYVRV YGNLKTFERK RSITAFAVKP ITDHNEVTYH
     FLQSIMQHLH LTKGAPPAGQ STGGAMPAGG RTPGGGSLYG GMSGAGGGGY GGMAQAGYGG
     GAAAASGLPG GDIAMDLKHV YNQQRALSST HGLGIEEALQ ELRNMGRNYN LQQVAQACEV
     LAAEGVLYST INDTTYKSCC CVAIMRPMVP VPKAAVMRSS QRALLALLLA ASLAAPTLAA
     RPSALLINTD DGLTRPDDCL DDDDCRRSEV CVNGGCLAVK DDGESCRQDE ECRSGTCRRS
     WWPTGSVCVT PCSADEDCPS RAPFCNTSPY MSRVPGGSRS SDGGAATAAA MAVLTRPIST
     TALGDAAAAG GVAADEGIAL KRDDEDDEDD DEDEDDEDDD DDEDDDDDDD DDDDDDDDDD
     DDDDDDDDDD DDGDDDDDDD DDEDEDEDED DGDEEGDGHY KGHGRHEVER HEDHHGHRGW
     KARRAALAEG PTDDAEDSAG KDGDDPHADG GHDQDQDHDH DHDHDHDHDH DHDGPQPGDA
     ASDVISTAGV ETQTSTSTST REARSGGKET NGRCVQCMED KDCVEGYYCD RGFRKTAHSC
     VELGKECSSY GDCSMGEYCD SSSKHCKPYF LGGMVKRLGK IATIEAESVA VSAREARL
//
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