GenomeNet

Database: UniProt
Entry: D8UH52_VOLCA
LinkDB: D8UH52_VOLCA
Original site: D8UH52_VOLCA 
ID   D8UH52_VOLCA            Unreviewed;       746 AA.
AC   D8UH52;
DT   05-OCT-2010, integrated into UniProtKB/TrEMBL.
DT   05-OCT-2010, sequence version 1.
DT   24-JAN-2024, entry version 55.
DE   RecName: Full=Autophagy-related protein 16 domain-containing protein {ECO:0000259|Pfam:PF08614};
GN   ORFNames=VOLCADRAFT_119815 {ECO:0000313|EMBL:EFJ40916.1};
OS   Volvox carteri f. nagariensis.
OC   Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae;
OC   CS clade; Chlamydomonadales; Volvocaceae; Volvox.
OX   NCBI_TaxID=3068 {ECO:0000313|Proteomes:UP000001058};
RN   [1] {ECO:0000313|EMBL:EFJ40916.1, ECO:0000313|Proteomes:UP000001058}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=f. Nagariensis / Eve {ECO:0000313|Proteomes:UP000001058};
RX   PubMed=20616280; DOI=10.1126/science.1188800;
RA   Prochnik S.E., Umen J., Nedelcu A.M., Hallmann A., Miller S.M., Nishii I.,
RA   Ferris P., Kuo A., Mitros T., Fritz-Laylin L.K., Hellsten U., Chapman J.,
RA   Simakov O., Rensing S.A., Terry A., Pangilinan J., Kapitonov V., Jurka J.,
RA   Salamov A., Shapiro H., Schmutz J., Grimwood J., Lindquist E., Lucas S.,
RA   Grigoriev I.V., Schmitt R., Kirk D., Rokhsar D.S.;
RT   "Genomic analysis of organismal complexity in the multicellular green alga
RT   Volvox carteri.";
RL   Science 329:223-226(2010).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; GL378404; EFJ40916.1; -; Genomic_DNA.
DR   RefSeq; XP_002957983.1; XM_002957937.1.
DR   AlphaFoldDB; D8UH52; -.
DR   STRING; 3068.D8UH52; -.
DR   GeneID; 9623107; -.
DR   KEGG; vcn:VOLCADRAFT_119815; -.
DR   eggNOG; KOG0288; Eukaryota.
DR   InParanoid; D8UH52; -.
DR   OrthoDB; 318210at2759; -.
DR   Proteomes; UP000001058; Unassembled WGS sequence.
DR   GO; GO:0043170; P:macromolecule metabolic process; IEA:UniProt.
DR   GO; GO:0006807; P:nitrogen compound metabolic process; IEA:UniProt.
DR   GO; GO:0044238; P:primary metabolic process; IEA:UniProt.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 3.
DR   InterPro; IPR013923; Autophagy-rel_prot_16_dom.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   InterPro; IPR019775; WD40_repeat_CS.
DR   InterPro; IPR036322; WD40_repeat_dom_sf.
DR   InterPro; IPR001680; WD40_rpt.
DR   PANTHER; PTHR22847; WD40 REPEAT PROTEIN; 1.
DR   PANTHER; PTHR22847:SF637; WD_REPEATS_REGION DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF08614; ATG16; 1.
DR   Pfam; PF00400; WD40; 3.
DR   SMART; SM00320; WD40; 4.
DR   SUPFAM; SSF50978; WD40 repeat-like; 1.
DR   PROSITE; PS00678; WD_REPEATS_1; 3.
DR   PROSITE; PS50082; WD_REPEATS_2; 4.
DR   PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001058};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW   ProRule:PRU00221}.
FT   DOMAIN          162..349
FT                   /note="Autophagy-related protein 16"
FT                   /evidence="ECO:0000259|Pfam:PF08614"
FT   REPEAT          523..556
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          605..646
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          647..692
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          712..746
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REGION          420..443
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          182..287
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          348..379
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   746 AA;  76327 MW;  E1A67403F84D1B5B CRC64;
     MHLCVLNIYS LYSLYSKFTS ESRRLSSTAP HQSPTVPRIP GWGGTTTSRA ATCIPRYCRS
     WLPTYCYSRS ASHNYTPSDG IRTVARCRQG AFRCPPAART PKQKRPLADP PLVVIGLLHG
     RPIHTVQYGK YSYGGVMQTS LLATAPEWVV ASCVGQLRHL YDTQTAPFLA PFADYASCLQ
     RTRELEVRLL QLDKEGAELR DENAALHSRL AAVDLAAAAN TAAQLEETRA ALSRAERELG
     VLYRDKANLL EEVVGASTAL TTARSALESS NTQLSQSRAE ISALREQLSA LGGSLESERA
     ARVAAAAELA AALAARDGAL AEAGRLRHEN AVLLRRLMEM KEGEAGRLND LNRMHEELLE
     QATRMRQEAE LDRQATELIR QRAVAAALSG VAVAGPLGQP PGAAPSVLVA APSLLPTATA
     GEAPPAPATA AAGGGGGGGS GLSSEWVGAT AAIQLGGGGG GGGGAPPLPI PTSLREVMGL
     LAGSPSYGNA GGGGGGGTVG LYDTSVRPPE LRVPARVPVA VVATAHKGGC NSLAPQCPGH
     FIASCGSDKT VALWDIALVA GPGCLGAATA ATGGASALTS GSLTAGGGGG GGGGGVCHLS
     PAITLMGMTG AVNDCAFTCD AAQVVAAGSD RALLVWDATS GRHRHTLTGH SGPVTAVALS
     PLDCRLAVSV SRDGNTVVTG HLDGSVLLWD VRQCRAGAAA PLMELRGGPG GSPVHRDSVV
     ATAFSADMSA LLTADKAGGL SFWSME
//
DBGET integrated database retrieval system