ID E0TAY8_PARBH Unreviewed; 679 AA.
AC E0TAY8;
DT 02-NOV-2010, integrated into UniProtKB/TrEMBL.
DT 02-NOV-2010, sequence version 1.
DT 27-MAR-2024, entry version 53.
DE SubName: Full=TraD {ECO:0000313|EMBL:ADM08197.1};
GN OrderedLocusNames=PB2503_00582 {ECO:0000313|EMBL:ADM08197.1};
OS Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Parvularculales;
OC Parvularculaceae; Parvularcula.
OX NCBI_TaxID=314260 {ECO:0000313|EMBL:ADM08197.1, ECO:0000313|Proteomes:UP000001302};
RN [1] {ECO:0000313|Proteomes:UP000001302}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-594 / HTCC2503 / KCTC 12087
RC {ECO:0000313|Proteomes:UP000001302};
RA Kang D.-M., Oh H.-M., Cho J.-C.;
RT "Genome sequence of Parvularcula bermudensis HTCC2503.";
RL Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ADM08197.1, ECO:0000313|Proteomes:UP000001302}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-594 / HTCC2503 / KCTC 12087
RC {ECO:0000313|Proteomes:UP000001302};
RX PubMed=21037002; DOI=10.1128/JB.01205-10;
RA Oh H.M., Kang I., Vergin K.L., Kang D., Rhee K.H., Giovannoni S.J.,
RA Cho J.C.;
RT "Complete genome sequence of strain HTCC2503T of Parvularcula bermudensis,
RT the type species of the order "Parvularculales" in the class
RT Alphaproteobacteria.";
RL J. Bacteriol. 193:305-306(2011).
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DR EMBL; CP002156; ADM08197.1; -; Genomic_DNA.
DR RefSeq; WP_013299171.1; NC_014414.1.
DR AlphaFoldDB; E0TAY8; -.
DR STRING; 314260.PB2503_00582; -.
DR KEGG; pbr:PB2503_00582; -.
DR eggNOG; COG3505; Bacteria.
DR HOGENOM; CLU_016763_4_1_5; -.
DR OrthoDB; 102453at2; -.
DR Proteomes; UP000001302; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd01127; TrwB_TraG_TraD_VirD4; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR019476; T4SS_TraD_DNA-bd.
DR PANTHER; PTHR37937; CONJUGATIVE TRANSFER: DNA TRANSPORT; 1.
DR PANTHER; PTHR37937:SF1; CONJUGATIVE TRANSFER: DNA TRANSPORT; 1.
DR Pfam; PF10412; TrwB_AAD_bind; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000001302};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 32..54
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 117..138
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 184..568
FT /note="Type IV secretion system coupling protein TraD DNA-
FT binding"
FT /evidence="ECO:0000259|Pfam:PF10412"
FT REGION 624..679
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 659..673
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 679 AA; 74797 MW; B301EDB6C44B214B CRC64;
MSGNASGPFK TFLRGGQVTL HTLRMFGQVM RFLSFAMVSL MLVIAWAGVM VNTAPEDRHY
AMKRYEAWAY RAAGFRESLE LNMRTADGSH APFPIGTILT HPAVAEHEKR FRRQLFVWGR
IGGLGGGFGF LLLTGLFVGR GSTLTRTNVK RGAAMASAQE LKAQIGAHNR WTAMKRKELR
GRPRYALAGI PYPVGSEVQH TGISGTIGSG KTQAIAALLD QIRKAGDRAV VFDLTGGFIA
PFYREDRDTI LNPLDRRAPA WSVFDEAKTK AGFDAIAAAM IPRAQKADPV WADSARMVFS
TAGQLLLGDG RASNKELVDL LLNAELRTLA PFFAGTPAAS IISADTPRMT NSVRMMLSTY
LDGLRLLPSR GDRFSITEWI ENDRAGSTLF LSSRADMHET LRPLLTVWMD TAVRALMSRP
RDPNRRIWFI MDEVAALQEL PSIMDGLARG RQFGAAFVLG IQAQSQLRDI YGPDGAQTLS
SVCRTKLILA ASDADTAKWY ADFLGRQETS RSNENVSFGA NTIRDGVMLA RQERIEHLVI
PEEIMNLRSL EGYLKMPEGF PLAKVKVPLV LREDREPAFL PREDQGLLIT RARAPHTVKA
MQATAHRPGS EDGQRDMFSE AERDGIDELI DPDTGEVSAT TRVEGVAQDG AEGADPPSPP
DRPRPRDIGQ DFPDWGFEP
//
