GenomeNet

Database: UniProt
Entry: E0VM82_PEDHC
LinkDB: E0VM82_PEDHC
Original site: E0VM82_PEDHC 
ID   E0VM82_PEDHC            Unreviewed;       374 AA.
AC   E0VM82;
DT   02-NOV-2010, integrated into UniProtKB/TrEMBL.
DT   02-NOV-2010, sequence version 1.
DT   30-AUG-2017, entry version 26.
DE   SubName: Full=Cyclic-nucleotide-gated cation channel, putative {ECO:0000313|EMBL:EEB14488.1};
DE   Flags: Fragment;
GN   ORFNames=Phum_PHUM303900 {ECO:0000313|EMBL:EEB14488.1};
OS   Pediculus humanus subsp. corporis (Body louse).
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
OC   Pterygota; Neoptera; Paraneoptera; Psocodea; Phthiraptera; Anoplura;
OC   Pediculidae; Pediculus.
OX   NCBI_TaxID=121224 {ECO:0000313|Proteomes:UP000009046};
RN   [1] {ECO:0000313|Proteomes:UP000009046}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=USDA {ECO:0000313|Proteomes:UP000009046};
RX   PubMed=20566863; DOI=10.1073/pnas.1003379107;
RA   Kirkness E.F., Haas B.J., Sun W., Braig H.R., Perotti M.A.,
RA   Clark J.M., Lee S.H., Robertson H.M., Kennedy R.C., Elhaik E.,
RA   Gerlach D., Kriventseva E.V., Elsik C.G., Graur D., Hill C.A.,
RA   Veenstra J.A., Walenz B., Tubio J.M., Ribeiro J.M., Rozas J.,
RA   Johnston J.S., Reese J.T., Popadic A., Tojo M., Raoult D., Reed D.L.,
RA   Tomoyasu Y., Krause E., Mittapalli O., Margam V.M., Li H.M.,
RA   Meyer J.M., Johnson R.M., Romero-Severson J., Vanzee J.P.,
RA   Alvarez-Ponce D., Vieira F.G., Aguade M., Guirao-Rico S., Anzola J.M.,
RA   Yoon K.S., Strycharz J.P., Unger M.F., Christley S., Lobo N.F.,
RA   Seufferheld M.J., Wang N., Dasch G.A., Struchiner C.J., Madey G.,
RA   Hannick L.I., Bidwell S., Joardar V., Caler E., Shao R., Barker S.C.,
RA   Cameron S., Bruggner R.V., Regier A., Johnson J., Viswanathan L.,
RA   Utterback T.R., Sutton G.G., Lawson D., Waterhouse R.M., Venter J.C.,
RA   Strausberg R.L., Berenbaum M.R., Collins F.H., Zdobnov E.M.,
RA   Pittendrigh B.R.;
RT   "Genome sequences of the human body louse and its primary endosymbiont
RT   provide insights into the permanent parasitic lifestyle.";
RL   Proc. Natl. Acad. Sci. U.S.A. 107:12168-12173(2010).
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DR   EMBL; DS235294; EEB14488.1; -; Genomic_DNA.
DR   RefSeq; XP_002427226.1; XM_002427181.1.
DR   STRING; 121225.PHUM303900-PA; -.
DR   EnsemblMetazoa; PHUM303900-RA; PHUM303900-PA; PHUM303900.
DR   GeneID; 8239165; -.
DR   KEGG; phu:Phum_PHUM303900; -.
DR   CTD; 8239165; -.
DR   InParanoid; E0VM82; -.
DR   PhylomeDB; E0VM82; -.
DR   Proteomes; UP000009046; Partially assembled WGS sequence.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005216; F:ion channel activity; IEA:InterPro.
DR   InterPro; IPR005821; Ion_trans_dom.
DR   Pfam; PF00520; Ion_trans; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000009046};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000009046};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    266    285       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    297    319       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    346    369       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN      266    374       Ion_trans. {ECO:0000259|Pfam:PF00520}.
FT   NON_TER     374    374       {ECO:0000313|EMBL:EEB14488.1}.
SQ   SEQUENCE   374 AA;  41695 MW;  72EB5DE27D3642F6 CRC64;
     MSTAKRLVAT LRGQKNSTQC GETTGCNSSS STRLFSSNPR GSIFNNSNSN NELDEIAIVS
     NAEPCQVKYG SGPLQSTANG PRLVPGIITS QGRMIGERLS ASGTRLNSGS PVQYTETGGR
     RTSRSVSKQS LLDLVSCKLG KSKQNQRYFS TSRDSLTAAY RTTAVSSTAS ELDLRKKARK
     KDLRGRLKLP PSVVLLPACG SEPLLRSKNW SEKGSSGGGG NLSVQKQEKG NLTPTESDRL
     LRSHMRLHVA APNWSFVFDP AGRLCYYWSI IVSLAFLYNF WVIIYRFAFQ EINRETIVLW
     FCLDYMSDLL YLIDIVFHFR TGYLEDGVLQ TDAAKLRNHY MNSTTFYIDC LCLLPLDFLY
     LSIGFNSILR TFRL
//
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