GenomeNet

Database: UniProt
Entry: E0VX60_PEDHC
LinkDB: E0VX60_PEDHC
Original site: E0VX60_PEDHC 
ID   E0VX60_PEDHC            Unreviewed;       344 AA.
AC   E0VX60;
DT   02-NOV-2010, integrated into UniProtKB/TrEMBL.
DT   02-NOV-2010, sequence version 1.
DT   24-JAN-2024, entry version 64.
DE   RecName: Full=Autophagy-related protein 16 domain-containing protein {ECO:0000259|Pfam:PF08614};
GN   Name=8236001 {ECO:0000313|EnsemblMetazoa:PHUM495740-PA};
GN   ORFNames=Phum_PHUM495740 {ECO:0000313|EMBL:EEB17966.1};
OS   Pediculus humanus subsp. corporis (Body louse).
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC   Neoptera; Paraneoptera; Psocodea; Phthiraptera; Anoplura; Pediculidae;
OC   Pediculus.
OX   NCBI_TaxID=121224;
RN   [1] {ECO:0000313|EMBL:EEB17966.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=USDA {ECO:0000313|EMBL:EEB17966.1};
RA   Kirkness E., Hannick L., Hass B., Bruggner R., Lawson D., Bidwell S.,
RA   Joardar V., Caler E., Walenz B., Inman J., Schobel S., Galinsky K.,
RA   Amedeo P., Strausberg R.;
RT   "Annotation of Pediculus humanus corporis strain USDA.";
RL   Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:EEB17966.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=USDA {ECO:0000313|EMBL:EEB17966.1};
RG   The Human Body Louse Genome Consortium;
RA   Kirkness E., Walenz B., Hass B., Bruggner R., Strausberg R.;
RT   "The genome of the human body louse.";
RL   Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EnsemblMetazoa:PHUM495740-PA}
RP   IDENTIFICATION.
RC   STRAIN=USDA {ECO:0000313|EnsemblMetazoa:PHUM495740-PA};
RG   EnsemblMetazoa;
RL   Submitted (MAY-2020) to UniProtKB.
CC   -!- SIMILARITY: Belongs to the WD repeat ATG16 family.
CC       {ECO:0000256|ARBA:ARBA00009271}.
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DR   EMBL; AAZO01006007; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; DS235829; EEB17966.1; -; Genomic_DNA.
DR   RefSeq; XP_002430704.1; XM_002430659.1.
DR   AlphaFoldDB; E0VX60; -.
DR   STRING; 121224.E0VX60; -.
DR   EnsemblMetazoa; PHUM495740-RA; PHUM495740-PA; PHUM495740.
DR   GeneID; 8236001; -.
DR   KEGG; phu:Phum_PHUM495740; -.
DR   CTD; 8236001; -.
DR   VEuPathDB; VectorBase:PHUM495740; -.
DR   eggNOG; KOG0288; Eukaryota.
DR   HOGENOM; CLU_000288_57_10_1; -.
DR   InParanoid; E0VX60; -.
DR   OMA; ITKCLGR; -.
DR   OrthoDB; 458014at2759; -.
DR   Proteomes; UP000009046; Unassembled WGS sequence.
DR   GO; GO:0000045; P:autophagosome assembly; IEA:InterPro.
DR   GO; GO:0043170; P:macromolecule metabolic process; IEA:UniProt.
DR   GO; GO:0006807; P:nitrogen compound metabolic process; IEA:UniProt.
DR   GO; GO:0044238; P:primary metabolic process; IEA:UniProt.
DR   CDD; cd22887; Atg16_CCD; 1.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR   InterPro; IPR045160; ATG16.
DR   InterPro; IPR013923; Autophagy-rel_prot_16_dom.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   InterPro; IPR019775; WD40_repeat_CS.
DR   InterPro; IPR036322; WD40_repeat_dom_sf.
DR   InterPro; IPR001680; WD40_rpt.
DR   PANTHER; PTHR19878; AUTOPHAGY PROTEIN 16-LIKE; 1.
DR   PANTHER; PTHR19878:SF8; AUTOPHAGY-RELATED 16, ISOFORM F; 1.
DR   Pfam; PF08614; ATG16; 1.
DR   Pfam; PF00400; WD40; 2.
DR   SMART; SM00320; WD40; 2.
DR   SUPFAM; SSF50978; WD40 repeat-like; 1.
DR   PROSITE; PS00678; WD_REPEATS_1; 1.
DR   PROSITE; PS50082; WD_REPEATS_2; 2.
DR   PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE   3: Inferred from homology;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Reference proteome {ECO:0000313|Proteomes:UP000009046};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW   ProRule:PRU00221}.
FT   DOMAIN          13..202
FT                   /note="Autophagy-related protein 16"
FT                   /evidence="ECO:0000259|Pfam:PF08614"
FT   REPEAT          254..288
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          299..332
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   COILED          42..98
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          162..218
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   344 AA;  39234 MW;  6F36027664C7ADFD CRC64;
     MVDRESSNWK LFIIEEIRKR NRNEINYFAD LIFYNNKLIE DCTILRDENL QLTIKNEKLR
     KEFREGGGGG SGANLDKIQS LEQKILHQQE ELTSLHKRRG EYAQQIVDLN TEVQLCKKTI
     AERDAKIANQ DEIIKSLKVE VSLYVNHIKE LDVLNQTIRD EHTALQLAFS SLEEKLRQVQ
     SENQRLVDRL MKYKSKDADK LNEENENFMK KKQAVMLKEL EEAVKESNRG VSPEVAFVMP
     MTVTAVPTSP YVHVDVHDGE VNAVRWSPVD RLVATGGADR KVKLWDVSKV GMCENKGILI
     GSNAGVMSVD FDSTGTLILA ASNDFASRVW TVADQRLRIL NICT
//
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