ID E0VX60_PEDHC Unreviewed; 344 AA.
AC E0VX60;
DT 02-NOV-2010, integrated into UniProtKB/TrEMBL.
DT 02-NOV-2010, sequence version 1.
DT 24-JAN-2024, entry version 64.
DE RecName: Full=Autophagy-related protein 16 domain-containing protein {ECO:0000259|Pfam:PF08614};
GN Name=8236001 {ECO:0000313|EnsemblMetazoa:PHUM495740-PA};
GN ORFNames=Phum_PHUM495740 {ECO:0000313|EMBL:EEB17966.1};
OS Pediculus humanus subsp. corporis (Body louse).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Paraneoptera; Psocodea; Phthiraptera; Anoplura; Pediculidae;
OC Pediculus.
OX NCBI_TaxID=121224;
RN [1] {ECO:0000313|EMBL:EEB17966.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=USDA {ECO:0000313|EMBL:EEB17966.1};
RA Kirkness E., Hannick L., Hass B., Bruggner R., Lawson D., Bidwell S.,
RA Joardar V., Caler E., Walenz B., Inman J., Schobel S., Galinsky K.,
RA Amedeo P., Strausberg R.;
RT "Annotation of Pediculus humanus corporis strain USDA.";
RL Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:EEB17966.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=USDA {ECO:0000313|EMBL:EEB17966.1};
RG The Human Body Louse Genome Consortium;
RA Kirkness E., Walenz B., Hass B., Bruggner R., Strausberg R.;
RT "The genome of the human body louse.";
RL Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblMetazoa:PHUM495740-PA}
RP IDENTIFICATION.
RC STRAIN=USDA {ECO:0000313|EnsemblMetazoa:PHUM495740-PA};
RG EnsemblMetazoa;
RL Submitted (MAY-2020) to UniProtKB.
CC -!- SIMILARITY: Belongs to the WD repeat ATG16 family.
CC {ECO:0000256|ARBA:ARBA00009271}.
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DR EMBL; AAZO01006007; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; DS235829; EEB17966.1; -; Genomic_DNA.
DR RefSeq; XP_002430704.1; XM_002430659.1.
DR AlphaFoldDB; E0VX60; -.
DR STRING; 121224.E0VX60; -.
DR EnsemblMetazoa; PHUM495740-RA; PHUM495740-PA; PHUM495740.
DR GeneID; 8236001; -.
DR KEGG; phu:Phum_PHUM495740; -.
DR CTD; 8236001; -.
DR VEuPathDB; VectorBase:PHUM495740; -.
DR eggNOG; KOG0288; Eukaryota.
DR HOGENOM; CLU_000288_57_10_1; -.
DR InParanoid; E0VX60; -.
DR OMA; ITKCLGR; -.
DR OrthoDB; 458014at2759; -.
DR Proteomes; UP000009046; Unassembled WGS sequence.
DR GO; GO:0000045; P:autophagosome assembly; IEA:InterPro.
DR GO; GO:0043170; P:macromolecule metabolic process; IEA:UniProt.
DR GO; GO:0006807; P:nitrogen compound metabolic process; IEA:UniProt.
DR GO; GO:0044238; P:primary metabolic process; IEA:UniProt.
DR CDD; cd22887; Atg16_CCD; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR045160; ATG16.
DR InterPro; IPR013923; Autophagy-rel_prot_16_dom.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR19878; AUTOPHAGY PROTEIN 16-LIKE; 1.
DR PANTHER; PTHR19878:SF8; AUTOPHAGY-RELATED 16, ISOFORM F; 1.
DR Pfam; PF08614; ATG16; 1.
DR Pfam; PF00400; WD40; 2.
DR SMART; SM00320; WD40; 2.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 2.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000009046};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 13..202
FT /note="Autophagy-related protein 16"
FT /evidence="ECO:0000259|Pfam:PF08614"
FT REPEAT 254..288
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 299..332
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT COILED 42..98
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 162..218
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 344 AA; 39234 MW; 6F36027664C7ADFD CRC64;
MVDRESSNWK LFIIEEIRKR NRNEINYFAD LIFYNNKLIE DCTILRDENL QLTIKNEKLR
KEFREGGGGG SGANLDKIQS LEQKILHQQE ELTSLHKRRG EYAQQIVDLN TEVQLCKKTI
AERDAKIANQ DEIIKSLKVE VSLYVNHIKE LDVLNQTIRD EHTALQLAFS SLEEKLRQVQ
SENQRLVDRL MKYKSKDADK LNEENENFMK KKQAVMLKEL EEAVKESNRG VSPEVAFVMP
MTVTAVPTSP YVHVDVHDGE VNAVRWSPVD RLVATGGADR KVKLWDVSKV GMCENKGILI
GSNAGVMSVD FDSTGTLILA ASNDFASRVW TVADQRLRIL NICT
//