ID E1SFP6_PANVC Unreviewed; 98 AA.
AC E1SFP6;
DT 30-NOV-2010, integrated into UniProtKB/TrEMBL.
DT 30-NOV-2010, sequence version 1.
DT 27-MAR-2024, entry version 88.
DE RecName: Full=DNA-binding protein Fis {ECO:0000256|HAMAP-Rule:MF_00166};
GN Name=fis {ECO:0000256|HAMAP-Rule:MF_00166,
GN ECO:0000313|EMBL:ADO10992.1};
GN OrderedLocusNames=Pvag_2836 {ECO:0000313|EMBL:ADO10992.1};
OS Pantoea vagans (strain C9-1) (Pantoea agglomerans (strain C9-1)).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC Erwiniaceae; Pantoea.
OX NCBI_TaxID=712898 {ECO:0000313|EMBL:ADO10992.1, ECO:0000313|Proteomes:UP000006631};
RN [1] {ECO:0000313|EMBL:ADO10992.1, ECO:0000313|Proteomes:UP000006631}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C9-1 {ECO:0000313|EMBL:ADO10992.1,
RC ECO:0000313|Proteomes:UP000006631};
RX PubMed=20952567; DOI=10.1128/JB.01122-10;
RA Smits T.H., Rezzonico F., Kamber T., Goesmann A., Ishimaru C.A.,
RA Stockwell V.O., Frey J.E., Duffy B.;
RT "The genome sequence of the biocontrol agent Pantoea vagans strain C9-1.";
RL J. Bacteriol. 192:6486-6487(2010).
CC -!- FUNCTION: Activates ribosomal RNA transcription. Plays a direct role in
CC upstream activation of rRNA promoters. {ECO:0000256|HAMAP-
CC Rule:MF_00166}.
CC -!- SUBUNIT: Homodimer. {ECO:0000256|HAMAP-Rule:MF_00166}.
CC -!- SIMILARITY: Belongs to the transcriptional regulatory Fis family.
CC {ECO:0000256|ARBA:ARBA00008559, ECO:0000256|HAMAP-Rule:MF_00166}.
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DR EMBL; CP002206; ADO10992.1; -; Genomic_DNA.
DR RefSeq; WP_003855228.1; NC_014562.1.
DR AlphaFoldDB; E1SFP6; -.
DR SMR; E1SFP6; -.
DR GeneID; 84692616; -.
DR KEGG; pva:Pvag_2836; -.
DR eggNOG; COG2901; Bacteria.
DR HOGENOM; CLU_158040_3_0_6; -.
DR OrthoDB; 9802388at2; -.
DR Proteomes; UP000006631; Chromosome.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:UniProtKB-UniRule.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR HAMAP; MF_00166; DNA_binding_Fis; 1.
DR InterPro; IPR005412; Fis_DNA-bd.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR PANTHER; PTHR47918; DNA-BINDING PROTEIN FIS; 1.
DR PANTHER; PTHR47918:SF1; DNA-BINDING PROTEIN FIS; 1.
DR Pfam; PF02954; HTH_8; 1.
DR PIRSF; PIRSF002097; DNA-binding_Fis; 1.
DR PRINTS; PR01591; DNABINDNGFIS.
DR PRINTS; PR01590; HTHFIS.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
PE 3: Inferred from homology;
KW Activator {ECO:0000256|HAMAP-Rule:MF_00166};
KW DNA-binding {ECO:0000256|HAMAP-Rule:MF_00166, ECO:0000313|EMBL:ADO10992.1};
KW Transcription {ECO:0000256|HAMAP-Rule:MF_00166};
KW Transcription regulation {ECO:0000256|HAMAP-Rule:MF_00166}.
FT DOMAIN 55..95
FT /note="DNA binding HTH"
FT /evidence="ECO:0000259|Pfam:PF02954"
FT DNA_BIND 74..93
FT /note="H-T-H motif"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_00166"
SQ SEQUENCE 98 AA; 11213 MW; 2E338F7A27A2263C CRC64;
MFEQRVNSDV LTVSTVNSQD QVTQKPLRDS VKQALKNYFA QLNGQDVSDL YELVLAEVEQ
PLLDMVMQYT RGNQTRAALM MGINRGTLRK KLKKYGMN
//
