ID E1UHW3_9VIRU Unreviewed; 239 AA.
AC E1UHW3;
DT 30-NOV-2010, integrated into UniProtKB/TrEMBL.
DT 30-NOV-2010, sequence version 1.
DT 24-JAN-2024, entry version 24.
DE RecName: Full=Capsid protein {ECO:0000256|ARBA:ARBA00018091};
GN Name=ORF4 {ECO:0000313|EMBL:CBA11950.1};
GN Synonyms=CP {ECO:0000313|EMBL:ASW15746.1};
OS Rice yellow mottle virus.
OC Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes;
OC Sobelivirales; Solemoviridae; Sobemovirus.
OX NCBI_TaxID=31744 {ECO:0000313|EMBL:CBA11950.1};
RN [1] {ECO:0000313|EMBL:CBA11950.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Tz1125 {ECO:0000313|EMBL:CBA11950.1}, and Tz1127
RC {ECO:0000313|EMBL:CBA11951.1};
RA Fargette D.;
RL Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:CBA11950.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Tz1125 {ECO:0000313|EMBL:CBA11950.1}, and Tz1127
RC {ECO:0000313|EMBL:CBA11951.1};
RA Pinel-Galzi A., Mpunami A., Sangu E., Rakotomalala M.;
RT "Recombination, selection and clock-like evolution of Rice yellow mottle
RT virus.";
RL Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:ASW15746.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Tz504 {ECO:0000313|EMBL:ASW15746.1}, and Tz515
RC {ECO:0000313|EMBL:ASW15751.1};
RA Hubert J., Pinel-Galzi A., Hebrard E.;
RT "Geographical Variation, Distribution and Diversity of Rice Yellow Mottle
RT Virus Phylotypes in Tanzania.";
RL Submitted (JUL-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the icosahedral plant coat protein family.
CC {ECO:0000256|ARBA:ARBA00007446}.
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DR EMBL; MF447505; ASW15746.1; -; Genomic_RNA.
DR EMBL; MF447510; ASW15751.1; -; Genomic_RNA.
DR EMBL; FN432910; CBA11950.1; -; Genomic_RNA.
DR EMBL; FN432911; CBA11951.1; -; Genomic_RNA.
DR GO; GO:0039617; C:T=3 icosahedral viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR Gene3D; 2.60.120.20; -; 1.
DR InterPro; IPR000937; Capsid_prot_S-dom_vir.
DR InterPro; IPR029053; Viral_coat.
DR Pfam; PF00729; Viral_coat; 1.
DR SUPFAM; SSF88633; Positive stranded ssRNA viruses; 1.
DR PROSITE; PS00555; ICOSAH_VIR_COAT_S; 1.
PE 3: Inferred from homology;
KW Capsid protein {ECO:0000313|EMBL:CBA11950.1};
KW Virion {ECO:0000313|EMBL:CBA11950.1}.
FT DOMAIN 34..233
FT /note="Icosahedral viral capsid protein S"
FT /evidence="ECO:0000259|Pfam:PF00729"
FT REGION 1..34
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..17
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 239 AA; 26144 MW; EEFD7E6996A49447 CRC64;
MARKGKKTNS NQNQQGKKSR RPRGRSAEPR LQRAPVAQAS RISGMVPGPL SSNVWPVNRS
VEFLMDFKRS ATSVDATIFN CVPFNLPRVW SLARCYSLWK PTRWDVVYLP EVSAATAGSI
EMCYLYDYAD TIPSDTGKMS RTAGFVTSSV WYGAEGCHLL TGGSARNAVV ASMDCSRVDW
KRVTSSIPSG VDPNVVNTIL PARLAVRSSI KPAVDDTPGK LYAIVSMVLR DPVDPTLNT
//