ID E1ZNL4_CHLVA Unreviewed; 689 AA.
AC E1ZNL4;
DT 30-NOV-2010, integrated into UniProtKB/TrEMBL.
DT 30-NOV-2010, sequence version 1.
DT 27-MAR-2024, entry version 47.
DE RecName: Full=RNA helicase {ECO:0000256|ARBA:ARBA00012552};
DE EC=3.6.4.13 {ECO:0000256|ARBA:ARBA00012552};
DE Flags: Fragment;
GN ORFNames=CHLNCDRAFT_36787 {ECO:0000313|EMBL:EFN52705.1};
OS Chlorella variabilis (Green alga).
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Trebouxiophyceae;
OC Chlorellales; Chlorellaceae; Chlorella clade; Chlorella.
OX NCBI_TaxID=554065 {ECO:0000313|Proteomes:UP000008141};
RN [1] {ECO:0000313|EMBL:EFN52705.1, ECO:0000313|Proteomes:UP000008141}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NC64A {ECO:0000313|EMBL:EFN52705.1,
RC ECO:0000313|Proteomes:UP000008141};
RX PubMed=20852019; DOI=10.1105/tpc.110.076406;
RA Blanc G., Duncan G., Agarkova I., Borodovsky M., Gurnon J., Kuo A.,
RA Lindquist E., Lucas S., Pangilinan J., Polle J., Salamov A., Terry A.,
RA Yamada T., Dunigan D.D., Grigoriev I.V., Claverie J.M., Van Etten J.L.;
RT "The Chlorella variabilis NC64A genome reveals adaptation to
RT photosymbiosis, coevolution with viruses, and cryptic sex.";
RL Plant Cell 22:2943-2955(2010).
CC -!- SIMILARITY: Belongs to the DEAD box helicase family. DDX21/DDX50
CC subfamily. {ECO:0000256|ARBA:ARBA00006517}.
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DR EMBL; GL433855; EFN52705.1; -; Genomic_DNA.
DR RefSeq; XP_005844807.1; XM_005844745.1.
DR AlphaFoldDB; E1ZNL4; -.
DR GeneID; 17352076; -.
DR KEGG; cvr:CHLNCDRAFT_36787; -.
DR eggNOG; KOG0331; Eukaryota.
DR InParanoid; E1ZNL4; -.
DR OMA; VLHGDMV; -.
DR OrthoDB; 1188at2759; -.
DR Proteomes; UP000008141; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR CDD; cd00268; DEADc; 1.
DR CDD; cd12937; GUCT_RH7_like; 1.
DR CDD; cd18787; SF2_C_DEAD; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR012562; GUCT.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR47959:SF13; ATP-DEPENDENT RNA HELICASE RHLE; 1.
DR PANTHER; PTHR47959; ATP-DEPENDENT RNA HELICASE RHLE-RELATED; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF08152; GUCT; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000008141}.
FT DOMAIN 182..353
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 381..530
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT NON_TER 689
FT /evidence="ECO:0000313|EMBL:EFN52705.1"
SQ SEQUENCE 689 AA; 73857 MW; 40B752E7CD97F5C7 CRC64;
MAATTVALSA QTVVAGSSRS VSSLARRGPL FRPLAALASG PQGGSTQGAL RQALGLRTDA
RRQARVAVAT VEPDLEEEQP AAVLGRVPLA AVAANLEAVL PQADGSLLGE SDIEEELLGD
APEGFSRSPR SFASLFTDDE AEEAAVVDPS LLLVNCGLSE GSVRALEERG ITSLFPIQKT
VFEPAMRGAD LIARAKTGSG KTLAFAIPII EKIMAGPRNL RKPQCLVLAP TRELAKQVER
EIAATAPGLG CGCYYGGNPI GPQLKELRRG VDIVVGTPGR IIDLIDQDAL DLSMVRFVVL
DEADQMLNVG FEKDVETILE NVPQERQTML FSATLPRWVK KLVKQYLNNP ENIDLVGEGN
TGQDPDSITA LAVPADARRS VLVDLLTVYG EGGKAIVFTQ TKREADEVAA SVGGHLPCGA
LHGDMSQRER EKVLASFRAN KLMVLVATDV AARGLDIPDV DVVVHYELPQ DPESFLHRSG
RTGRAGKSGT AIAMFQPKEI GYFKRILRET EVQGVKLITA PSPTQVIEAA AKQVMYRLDG
VDAEVRKYFT PVAKMLLSSR DPQEALEAAL AALSGIQEVP EPRSLLTMEE GIQTLQMMSK
PGRITRPAHV SGIVGKLLEG TAFNAGAVGR IRMLEEEGQC GAAFDVPMDL GREIMARVDE
LHKRGVSLTV PESLPAEEDL YQMGRYGSR
//
