ID E2RWF1_9BACT Unreviewed; 311 AA.
AC E2RWF1;
DT 11-JAN-2011, integrated into UniProtKB/TrEMBL.
DT 11-JAN-2011, sequence version 1.
DT 24-JAN-2024, entry version 30.
DE SubName: Full=RNA polymerase factor sigma-54 {ECO:0000313|EMBL:BAJ23977.1};
DE Flags: Fragment;
OS uncultured bacterium.
OC Bacteria; environmental samples.
OX NCBI_TaxID=77133 {ECO:0000313|EMBL:BAJ23977.1};
RN [1] {ECO:0000313|EMBL:BAJ23977.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=20833789; DOI=10.1128/AEM.00464-10;
RA Uchiyama T., Miyazaki K.;
RT "Product-induced gene expression, a product-responsive reporter assay used
RT to screen metagenomic libraries for enzyme-encoding genes.";
RL Appl. Environ. Microbiol. 76:7029-7035(2010).
CC -!- SIMILARITY: Belongs to the sigma-54 factor family.
CC {ECO:0000256|ARBA:ARBA00008798}.
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DR EMBL; AB545791; BAJ23977.1; -; Genomic_DNA.
DR AlphaFoldDB; E2RWF1; -.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0001216; F:DNA-binding transcription activator activity; IEA:InterPro.
DR GO; GO:0016779; F:nucleotidyltransferase activity; IEA:UniProtKB-KW.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR000394; RNA_pol_sigma_54.
DR InterPro; IPR007046; RNA_pol_sigma_54_core-bd.
DR InterPro; IPR007634; RNA_pol_sigma_54_DNA-bd.
DR NCBIfam; TIGR02395; rpoN_sigma; 1.
DR PANTHER; PTHR32248; RNA POLYMERASE SIGMA-54 FACTOR; 1.
DR PANTHER; PTHR32248:SF4; RNA POLYMERASE SIGMA-54 FACTOR; 1.
DR Pfam; PF04963; Sigma54_CBD; 1.
DR Pfam; PF04552; Sigma54_DBD; 1.
DR PRINTS; PR00045; SIGMA54FCT.
DR PROSITE; PS00717; SIGMA54_1; 1.
DR PROSITE; PS50044; SIGMA54_3; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 7..139
FT /note="RNA polymerase sigma factor 54 core-binding"
FT /evidence="ECO:0000259|Pfam:PF04963"
FT DOMAIN 154..309
FT /note="RNA polymerase sigma factor 54 DNA-binding"
FT /evidence="ECO:0000259|Pfam:PF04552"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:BAJ23977.1"
SQ SEQUENCE 311 AA; 34942 MW; 89B04244EA96C81E CRC64;
DHPPASECEW NIALKLIQQL APPGIAARDL AECLTLQLRA MPSDTSCRDL AIDIANSALE
KVGRCDYAGL MRTFNCTEED ARQACLLIRK LDPRPGTQFM SIDPSCYIVP DVIVRKIGKQ
WMALPNNDAV PRAQLHSTYA RLFKESRYQE RGLMARALQE ARWLIRSLEQ RNSTILRVAQ
AIVARQQTFF DYGDVALRPL MLSEIAEELN MHESTVSRAT SNKYLASPRG IFEFKHFFSR
ELATRSGGTC SAGSVRALIQ EMIDAEDPKN PLSDVMLARK LAGQGVMVAR RTVSKYRAQI
KYPSAELRRA P
//
