ID E3CNH4_STRVE Unreviewed; 417 AA.
AC E3CNH4;
DT 11-JAN-2011, integrated into UniProtKB/TrEMBL.
DT 11-JAN-2011, sequence version 1.
DT 24-JAN-2024, entry version 55.
DE SubName: Full=Putative diaminopimelate decarboxylase {ECO:0000313|EMBL:EFQ60117.1};
GN ORFNames=HMPREF9192_0145 {ECO:0000313|EMBL:EFQ60117.1};
OS Streptococcus vestibularis F0396.
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
OC Streptococcus.
OX NCBI_TaxID=904306 {ECO:0000313|EMBL:EFQ60117.1, ECO:0000313|Proteomes:UP000004896};
RN [1] {ECO:0000313|EMBL:EFQ60117.1, ECO:0000313|Proteomes:UP000004896}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=F0396 {ECO:0000313|EMBL:EFQ60117.1,
RC ECO:0000313|Proteomes:UP000004896};
RA Durkin A.S., Madupu R., Torralba M., Gillis M., Methe B., Sutton G.,
RA Nelson K.E.;
RL Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC Evidence={ECO:0000256|ARBA:ARBA00001933,
CC ECO:0000256|PIRSR:PIRSR600183-50};
CC -!- SIMILARITY: Belongs to the Orn/Lys/Arg decarboxylase class-II family.
CC {ECO:0000256|RuleBase:RU003737}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EFQ60117.1}.
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DR EMBL; AEKO01000003; EFQ60117.1; -; Genomic_DNA.
DR RefSeq; WP_003092158.1; NZ_AEKO01000003.1.
DR AlphaFoldDB; E3CNH4; -.
DR GeneID; 77297831; -.
DR eggNOG; COG0019; Bacteria.
DR OrthoDB; 9802241at2; -.
DR Proteomes; UP000004896; Unassembled WGS sequence.
DR GO; GO:0008836; F:diaminopimelate decarboxylase activity; IEA:InterPro.
DR GO; GO:0009089; P:lysine biosynthetic process via diaminopimelate; IEA:InterPro.
DR CDD; cd06828; PLPDE_III_DapDC; 1.
DR Gene3D; 3.20.20.10; Alanine racemase; 1.
DR InterPro; IPR009006; Ala_racemase/Decarboxylase_C.
DR InterPro; IPR002986; DAP_deCOOHase_LysA.
DR InterPro; IPR022643; De-COase2_C.
DR InterPro; IPR022644; De-COase2_N.
DR InterPro; IPR000183; Orn/DAP/Arg_de-COase.
DR InterPro; IPR029066; PLP-binding_barrel.
DR PANTHER; PTHR43727; DIAMINOPIMELATE DECARBOXYLASE; 1.
DR PANTHER; PTHR43727:SF2; DIAMINOPIMELATE DECARBOXYLASE 1, CHLOROPLASTIC-RELATED; 1.
DR Pfam; PF02784; Orn_Arg_deC_N; 1.
DR Pfam; PF00278; Orn_DAP_Arg_deC; 1.
DR PRINTS; PR01181; DAPDCRBXLASE.
DR PRINTS; PR01179; ODADCRBXLASE.
DR SUPFAM; SSF50621; Alanine racemase C-terminal domain-like; 1.
DR SUPFAM; SSF51419; PLP-binding barrel; 1.
PE 3: Inferred from homology;
KW Pyridoxal phosphate {ECO:0000256|PIRSR:PIRSR600183-50}.
FT DOMAIN 31..279
FT /note="Orn/DAP/Arg decarboxylase 2 N-terminal"
FT /evidence="ECO:0000259|Pfam:PF02784"
FT DOMAIN 280..367
FT /note="Orn/DAP/Arg decarboxylase 2 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF00278"
FT ACT_SITE 340
FT /note="Proton donor"
FT /evidence="ECO:0000256|PIRSR:PIRSR600183-50"
FT MOD_RES 55
FT /note="N6-(pyridoxal phosphate)lysine"
FT /evidence="ECO:0000256|PIRSR:PIRSR600183-50"
SQ SEQUENCE 417 AA; 46306 MW; E95D0D9E9C49C606 CRC64;
MTKTPFITAD KLDQITAEFP TPFHLYDEKG IRETARAVNA AFSWNPGFKE FFAVKATPNP
AILKILKEEG CGVDCATDTE LVMSNKIGFD STAISFTSND TRAEEFVYAR DINATINLDA
YEDIFFLEEA AGLPETLSLR FNPGGVFSLG TDIMDHPEES KFGMTKEQLF KGYAYLKEKG
VKSFGLHAFL ASNTVTNEYY PTLAAQLFEL AVEIKNELGV SLDFINLSGG VGVDYTPANK
QNDIAVIGEG VHTKFDEILV PNDLGDISIY TELGRFMTAP HGLVVTKVLH IKDTYRRYVG
VDASAVNLLR PAMYDAYHHI TNMTNPNGDI QVVDVTGSLC ENNDKFAKNR ELPEARIGDT
LVIHDTGAHG FSMGYNYNGR LRSAEILYQE DGTARMIRRA ETMNDYFATL DGFDFEI
//