GenomeNet

Database: UniProt
Entry: E3N4T0_CAERE
LinkDB: E3N4T0_CAERE
Original site: E3N4T0_CAERE 
ID   E3N4T0_CAERE            Unreviewed;       257 AA.
AC   E3N4T0;
DT   11-JAN-2011, integrated into UniProtKB/TrEMBL.
DT   11-JAN-2011, sequence version 1.
DT   24-JAN-2024, entry version 61.
DE   RecName: Full=Translocon-associated protein subunit alpha {ECO:0000256|ARBA:ARBA00020280};
DE   AltName: Full=Signal sequence receptor subunit alpha {ECO:0000256|ARBA:ARBA00031071};
GN   Name=Cre-trap-1 {ECO:0000313|EMBL:EFO86429.1};
GN   ORFNames=CRE_01218 {ECO:0000313|EMBL:EFO86429.1}, FL81_22011
GN   {ECO:0000313|EMBL:POM36286.1}, FL82_08028
GN   {ECO:0000313|EMBL:OZG00983.1}, GCK72_000882
GN   {ECO:0000313|EMBL:KAF1769069.1};
OS   Caenorhabditis remanei (Caenorhabditis vulgaris).
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC   Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC   Caenorhabditis.
OX   NCBI_TaxID=31234 {ECO:0000313|Proteomes:UP000008281};
RN   [1] {ECO:0000313|Proteomes:UP000008281}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=PB4641 {ECO:0000313|Proteomes:UP000008281};
RG   Caenorhabditis remanei Sequencing Consortium;
RA   Wilson R.K.;
RT   "PCAP assembly of the Caenorhabditis remanei genome.";
RL   Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:EFO86429.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=PB4641 {ECO:0000313|EMBL:EFO86429.1};
RG   The Caenorhabditis remanei Sequencing Consortium;
RA   Wilson R.K.;
RT   "PCAP assembly of the Caenorhabditis remanei genome.";
RL   Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:POM36286.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=PX356 {ECO:0000313|EMBL:POM36286.1};
RX   PubMed=26114425; DOI=10.1371/journal.pgen.1005323;
RA   Fierst J.L., Willis J.H., Thomas C.G., Wang W., Reynolds R.M.,
RA   Ahearne T.E., Cutter A.D., Phillips P.C.;
RT   "Reproductive Mode and the Evolution of Genome Size and Structure in
RT   Caenorhabditis Nematodes.";
RL   PLoS Genet. 11:e1005323-e1005323(2015).
RN   [4] {ECO:0000313|EMBL:POM36286.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=PX356 {ECO:0000313|EMBL:POM36286.1};
RX   PubMed=26394399; DOI=10.1371/journal.pgen.1005497;
RA   Fierst J.L., Willis J.H., Thomas C.G., Wang W., Reynolds R.M.,
RA   Ahearne T.E., Cutter A.D., Phillips P.C.;
RT   "Correction: Reproductive Mode and the Evolution of Genome Size and
RT   Structure in Caenorhabditis Nematodes.";
RL   PLoS Genet. 11:e1005497-e1005497(2015).
RN   [5] {ECO:0000313|EMBL:OZG00983.1, ECO:0000313|Proteomes:UP000216624}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=PX439 {ECO:0000313|EMBL:OZG00983.1,
RC   ECO:0000313|Proteomes:UP000216624};
RA   de Groot N.N.;
RL   Submitted (AUG-2017) to the EMBL/GenBank/DDBJ databases.
RN   [6] {ECO:0000313|EMBL:POM36286.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=PX356 {ECO:0000313|EMBL:POM36286.1};
RA   Banno H., Chua N.-H.;
RL   Submitted (OCT-2017) to the EMBL/GenBank/DDBJ databases.
RN   [7] {ECO:0000313|EMBL:KAF1769069.1, ECO:0000313|Proteomes:UP000483820}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=PX506 {ECO:0000313|EMBL:KAF1769069.1,
RC   ECO:0000313|Proteomes:UP000483820};
RC   TISSUE=Whole organism {ECO:0000313|EMBL:KAF1769069.1};
RA   Teterina A.A., Willis J.H., Phillips P.C.;
RT   "Chromosome-level assembly of the Caenorhabditis remanei genome.";
RL   Submitted (DEC-2019) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: TRAP proteins are part of a complex whose function is to bind
CC       calcium to the ER membrane and thereby regulate the retention of ER
CC       resident proteins. May be involved in the recycling of the
CC       translocation apparatus after completion of the translocation process
CC       or may function as a membrane-bound chaperone facilitating folding of
CC       translocated proteins. {ECO:0000256|ARBA:ARBA00025620}.
CC   -!- SUBUNIT: Heterotetramer of TRAP-alpha, TRAP-beta, TRAP-delta and TRAP-
CC       gamma. Interacts with palmitoylated calnexin (CALX), the interaction is
CC       required for efficient folding of glycosylated proteins.
CC       {ECO:0000256|ARBA:ARBA00025854}.
CC   -!- SUBCELLULAR LOCATION: Endoplasmic reticulum membrane
CC       {ECO:0000256|ARBA:ARBA00004115}; Single-pass type I membrane protein
CC       {ECO:0000256|ARBA:ARBA00004115}. Membrane
CC       {ECO:0000256|ARBA:ARBA00004479}; Single-pass type I membrane protein
CC       {ECO:0000256|ARBA:ARBA00004479}.
CC   -!- SIMILARITY: Belongs to the TRAP-alpha family.
CC       {ECO:0000256|ARBA:ARBA00006776}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; DS268527; EFO86429.1; -; Genomic_DNA.
DR   EMBL; WUAV01000001; KAF1769069.1; -; Genomic_DNA.
DR   EMBL; NMWX01000005; OZG00983.1; -; Genomic_DNA.
DR   EMBL; LFJK02000611; POM36286.1; -; Genomic_DNA.
DR   RefSeq; XP_003096605.1; XM_003096557.1.
DR   AlphaFoldDB; E3N4T0; -.
DR   STRING; 31234.E3N4T0; -.
DR   EnsemblMetazoa; CRE01218.1; CRE01218.1; WBGene00057123.
DR   GeneID; 9824617; -.
DR   KEGG; crq:GCK72_000882; -.
DR   CTD; 9824617; -.
DR   eggNOG; KOG1631; Eukaryota.
DR   HOGENOM; CLU_073618_2_0_1; -.
DR   OMA; EWIPRDA; -.
DR   OrthoDB; 5403315at2759; -.
DR   Proteomes; UP000008281; Unassembled WGS sequence.
DR   Proteomes; UP000216624; Unassembled WGS sequence.
DR   Proteomes; UP000483820; Chromosome i.
DR   GO; GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.
DR   InterPro; IPR005595; TRAP_alpha.
DR   PANTHER; PTHR12924:SF0; TRANSLOCON-ASSOCIATED PROTEIN SUBUNIT ALPHA; 1.
DR   PANTHER; PTHR12924; TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT; 1.
DR   Pfam; PF03896; TRAP_alpha; 1.
PE   3: Inferred from homology;
KW   Endoplasmic reticulum {ECO:0000256|ARBA:ARBA00022824};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008281};
KW   Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|SAM:Phobius}.
FT   SIGNAL          1..19
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT   CHAIN           20..257
FT                   /note="Translocon-associated protein subunit alpha"
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT                   /id="PRO_5015090046"
FT   TRANSMEM        180..197
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   REGION          236..257
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   257 AA;  28488 MW;  CA6D407040CA40C2 CRC64;
     MKLSAILLLS VVGLCAVYAA DVVDGEVTDD GPKTVQEEES LDIGASPDAG LAFHFVQPAD
     ANVVHEFYTG KPVKFLIGFQ NKGEKDFVVK YSETSFRFPT DYNYHLQNFT RGEYNRRVAP
     KEEVTLDYGF YAHETFAGRP VGLVVNVHYQ DADGNAFVNN VFNQTVNILE DDSGFSGETG
     FLFIFFVALS IGGLYLANQF LSKLSRKSGL SKRRVVEQGT SSEVDFEWIP RDAVKNKEKR
     SPVAGSPKAR KTAKKTD
//
DBGET integrated database retrieval system