ID E4KN84_9LACT Unreviewed; 173 AA.
AC E4KN84;
DT 08-FEB-2011, integrated into UniProtKB/TrEMBL.
DT 08-FEB-2011, sequence version 1.
DT 24-JAN-2024, entry version 46.
DE SubName: Full=RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EFR31640.1};
GN ORFNames=HMPREF9257_0061 {ECO:0000313|EMBL:EFR31640.1};
OS Eremococcus coleocola ACS-139-V-Col8.
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Aerococcaceae; Eremococcus.
OX NCBI_TaxID=908337 {ECO:0000313|EMBL:EFR31640.1, ECO:0000313|Proteomes:UP000005990};
RN [1] {ECO:0000313|EMBL:EFR31640.1, ECO:0000313|Proteomes:UP000005990}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ACS-139-V-Col8 {ECO:0000313|EMBL:EFR31640.1,
RC ECO:0000313|Proteomes:UP000005990};
RA Durkin A.S., Madupu R., Torralba M., Gillis M., Methe B., Sutton G.,
RA Nelson K.E.;
RL Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EFR31640.1}.
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DR EMBL; AENN01000006; EFR31640.1; -; Genomic_DNA.
DR RefSeq; WP_006417772.1; NZ_AENN01000006.1.
DR AlphaFoldDB; E4KN84; -.
DR STRING; 908337.HMPREF9257_0061; -.
DR eggNOG; ENOG5033MDR; Bacteria.
DR OrthoDB; 2248780at2; -.
DR Proteomes; UP000005990; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR Pfam; PF02954; HTH_8; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000005990}.
FT DOMAIN 131..155
FT /note="DNA binding HTH"
FT /evidence="ECO:0000259|Pfam:PF02954"
SQ SEQUENCE 173 AA; 20200 MW; AF790E34459AA074 CRC64;
MPDQLLANYQ ALIYKTLNRL GISKNHCYYD DYYQELSLKL LALADSFQGD PLGEDRFRFT
AYVQKGLYWY LLDLLKARPL KHEIAVEEIM TVKESLAQPD SRMVSHHRLM AFYGAVDRHL
DESDRQLFYL LADSSFSMTE IAELLGISRK TLYKRKAKLQ DQLGSYKFLL KEG
//
