ID E4RVR1_LEAB4 Unreviewed; 604 AA.
AC E4RVR1;
DT 08-FEB-2011, integrated into UniProtKB/TrEMBL.
DT 08-FEB-2011, sequence version 1.
DT 27-MAR-2024, entry version 61.
DE SubName: Full=Alpha amylase catalytic region {ECO:0000313|EMBL:ADQ17983.1};
GN OrderedLocusNames=Lbys_2307 {ECO:0000313|EMBL:ADQ17983.1};
OS Leadbetterella byssophila (strain DSM 17132 / JCM 16389 / KACC 11308 / NBRC
OS 106382 / 4M15).
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Spirosomataceae;
OC Leadbetterella.
OX NCBI_TaxID=649349 {ECO:0000313|EMBL:ADQ17983.1, ECO:0000313|Proteomes:UP000007435};
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 17132;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N.,
RA Teshima H., Brettin T., Detter J.C., Han C., Tapia R., Land M., Hauser L.,
RA Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindall B.,
RA Pomrenke H.G., Brambilla E., Klenk H.-P., Eisen J.A.;
RT "The complete genome of Leadbetterella byssophila DSM 17132.";
RL Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ADQ17983.1, ECO:0000313|Proteomes:UP000007435}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 17132 / JCM 16389 / KACC 11308 / NBRC 106382 / 4M15
RC {ECO:0000313|Proteomes:UP000007435};
RX PubMed=21475582; DOI=10.4056/sigs.1413518;
RA Abt B., Teshima H., Lucas S., Lapidus A., Del Rio T.G., Nolan M., Tice H.,
RA Cheng J.F., Pitluck S., Liolios K., Pagani I., Ivanova N., Mavromatis K.,
RA Pati A., Tapia R., Han C., Goodwin L., Chen A., Palaniappan K., Land M.,
RA Hauser L., Chang Y.J., Jeffries C.D., Rohde M., Goker M., Tindall B.J.,
RA Detter J.C., Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA Klenk H.P., Kyrpides N.C.;
RT "Complete genome sequence of Leadbetterella byssophila type strain
RT (4M15).";
RL Stand. Genomic Sci. 4:2-12(2011).
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DR EMBL; CP002305; ADQ17983.1; -; Genomic_DNA.
DR RefSeq; WP_013409024.1; NC_014655.1.
DR AlphaFoldDB; E4RVR1; -.
DR STRING; 649349.Lbys_2307; -.
DR CAZy; GH13; Glycoside Hydrolase Family 13.
DR KEGG; lby:Lbys_2307; -.
DR eggNOG; COG0366; Bacteria.
DR HOGENOM; CLU_006462_7_3_10; -.
DR OrthoDB; 9806009at2; -.
DR Proteomes; UP000007435; Chromosome.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR CDD; cd11340; AmyAc_bac_CMD_like_3; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR Gene3D; 2.60.40.1180; Golgi alpha-mannosidase II; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR015171; Cyc-maltodext_N.
DR InterPro; IPR019492; Cyclo-malto-dextrinase_C.
DR InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR InterPro; IPR013780; Glyco_hydro_b.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR PANTHER; PTHR10357; ALPHA-AMYLASE FAMILY MEMBER; 1.
DR PANTHER; PTHR10357:SF234; INTRACELLULAR MALTOGENIC AMYLASE; 1.
DR Pfam; PF00128; Alpha-amylase; 1.
DR Pfam; PF10438; Cyc-maltodext_C; 1.
DR Pfam; PF09087; Cyc-maltodext_N; 1.
DR SMART; SM00642; Aamy; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF81296; E set domains; 1.
DR SUPFAM; SSF51011; Glycosyl hydrolase domain; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000007435};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..16
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 17..604
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5003185863"
FT DOMAIN 119..516
FT /note="Glycosyl hydrolase family 13 catalytic"
FT /evidence="ECO:0000259|SMART:SM00642"
FT REGION 127..150
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 134..150
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 604 AA; 69306 MW; 8F900B77B3A80830 CRC64;
MKKIIFMLLF AFSAQAQNIR VEPASWWVGM KNRNLQILLH AKGIGSSKVE ISYPGIELKQ
VHKAESPNYL FLDIEIKPEA AAGKVPIALK NPDHIAYLDL QERSSKAGEG FDGADVIYLI
TPDRFANGDP SNDNTSDTKE KANRKHYNGR HGGDLKGISA QLDYIRNMGF TTLWCMPLLE
NNLEEVTYHG YSITDYYRID PRFGSNEEFK GIVQKSKEKG LKWIMDMVPN HCGIDHWWMK
DLPFEDWINN KGKFTPSNHR REVHQDIHVS QKDLEAMKGG WFVPTMPDLN QRNPFMAKYL
TQNTIWWIEY AGLAGLRVDT WPYSEKAFLQ QWTKDILDEY PSLHMVGEEM TLKASTIAYW
QQGKVNPDGY KSYIPGMMDF PFQGALVQAL TEKEDFHTGW ARLYSAMADD YLYPAPDKLV
IFADNHDMNR FFTQIGEDKE LFKMGLAVVA TMRGIPQVYY GTEIGMSNPD SEEHGVLRAD
MPGGWKGDKV NAFTGENLDP LQKELQDFTR RLFNWRKGSK AVHAGKMIHF VPQQGVYTYM
RFTATEKVWV ILNKNKEEVE IPFQEYTEIT EGNSTFSDAL DGSIWKEKVK IPSMSFRILV
AKGE
//
