ID E4RWF8_LEAB4 Unreviewed; 701 AA.
AC E4RWF8;
DT 08-FEB-2011, integrated into UniProtKB/TrEMBL.
DT 08-FEB-2011, sequence version 1.
DT 27-MAR-2024, entry version 62.
DE SubName: Full=Glycosyl hydrolase family 88 {ECO:0000313|EMBL:ADQ18031.1};
GN OrderedLocusNames=Lbys_2355 {ECO:0000313|EMBL:ADQ18031.1};
OS Leadbetterella byssophila (strain DSM 17132 / JCM 16389 / KACC 11308 / NBRC
OS 106382 / 4M15).
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Spirosomataceae;
OC Leadbetterella.
OX NCBI_TaxID=649349 {ECO:0000313|EMBL:ADQ18031.1, ECO:0000313|Proteomes:UP000007435};
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 17132;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N.,
RA Teshima H., Brettin T., Detter J.C., Han C., Tapia R., Land M., Hauser L.,
RA Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindall B.,
RA Pomrenke H.G., Brambilla E., Klenk H.-P., Eisen J.A.;
RT "The complete genome of Leadbetterella byssophila DSM 17132.";
RL Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ADQ18031.1, ECO:0000313|Proteomes:UP000007435}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 17132 / JCM 16389 / KACC 11308 / NBRC 106382 / 4M15
RC {ECO:0000313|Proteomes:UP000007435};
RX PubMed=21475582; DOI=10.4056/sigs.1413518;
RA Abt B., Teshima H., Lucas S., Lapidus A., Del Rio T.G., Nolan M., Tice H.,
RA Cheng J.F., Pitluck S., Liolios K., Pagani I., Ivanova N., Mavromatis K.,
RA Pati A., Tapia R., Han C., Goodwin L., Chen A., Palaniappan K., Land M.,
RA Hauser L., Chang Y.J., Jeffries C.D., Rohde M., Goker M., Tindall B.J.,
RA Detter J.C., Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA Klenk H.P., Kyrpides N.C.;
RT "Complete genome sequence of Leadbetterella byssophila type strain
RT (4M15).";
RL Stand. Genomic Sci. 4:2-12(2011).
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DR EMBL; CP002305; ADQ18031.1; -; Genomic_DNA.
DR RefSeq; WP_013409072.1; NC_014655.1.
DR AlphaFoldDB; E4RWF8; -.
DR STRING; 649349.Lbys_2355; -.
DR CAZy; GH105; Glycoside Hydrolase Family 105.
DR KEGG; lby:Lbys_2355; -.
DR eggNOG; COG2755; Bacteria.
DR eggNOG; COG4225; Bacteria.
DR HOGENOM; CLU_393189_0_0_10; -.
DR OrthoDB; 9807186at2; -.
DR Proteomes; UP000007435; Chromosome.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR CDD; cd01821; Rhamnogalacturan_acetylesterase_like; 1.
DR Gene3D; 1.50.10.10; -; 1.
DR Gene3D; 3.40.50.1110; SGNH hydrolase; 1.
DR InterPro; IPR008928; 6-hairpin_glycosidase_sf.
DR InterPro; IPR012341; 6hp_glycosidase-like_sf.
DR InterPro; IPR010905; Glyco_hydro_88.
DR InterPro; IPR037459; RhgT-like.
DR InterPro; IPR013830; SGNH_hydro.
DR InterPro; IPR036514; SGNH_hydro_sf.
DR PANTHER; PTHR33886; UNSATURATED RHAMNOGALACTURONAN HYDROLASE (EUROFUNG); 1.
DR PANTHER; PTHR33886:SF8; WALL GLYCOSYL HYDROLASE YTER, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G14630)-RELATED; 1.
DR Pfam; PF07470; Glyco_hydro_88; 1.
DR Pfam; PF13472; Lipase_GDSL_2; 1.
DR SUPFAM; SSF52266; SGNH hydrolase; 1.
DR SUPFAM; SSF48208; Six-hairpin glycosidases; 1.
PE 4: Predicted;
KW Hydrolase {ECO:0000313|EMBL:ADQ18031.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000007435};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..19
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 20..701
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5003186986"
FT DOMAIN 478..676
FT /note="SGNH hydrolase-type esterase"
FT /evidence="ECO:0000259|Pfam:PF13472"
SQ SEQUENCE 701 AA; 78766 MW; 1E8396B79D78D00A CRC64;
MRIKNFLVAA LLSCGSAFGQ VNDFTTPLHL LQSQYETPYG ALTTEKIKED LDRVFHFLDA
STPAKVIDGK TGKELKDLSK MDENTRLQQG SFRLASYEWG VTYSGMLEAA KATGDEKYFK
YVQDRFKFLA EAKPHFIKQL DQYGVIDPQM RQMLKPHALD DAGAMCAAMI KFEQNKPNFD
LRSVIDNYMN YIMYKEYRLA DGTFARKRPQ LNTLWLDDMY MAVPAIAQMG RLTGDMKYFN
EATRQIKQFT QRMFVPEKGL YMHGWVESSD QHPAFFWGRA NGWALLTMAE VLDVLPLSHP
DRPWLLQQFK AHVKGLSKLQ SKEGFWHQLL DRNDSYLETS ATAIYTYCIA KGVNQGWLDP
IAFGPVAYHG WSAVSTKINA QGQVEGTCVG TGMGFDPAFY YYRPVNVYAA HGYGPVISAG
AEMIRLLKQF HPRLNDSAVQ FYKEEQTYPS PIFSVSSRKG DVPAGSSRKG NQPVVFLIGD
STVKNGTGEG DNGQWGWGSF FDQFVKTATV ENHALGGRSS RTFITEGLWE KVYNEIKKGD
YLLIQFGHND GGPLNTGRAR ASLRGIGEEV ESVVMAGTGG EEKVYTFGHY LRTYIRQAKA
KGANPIVLSP TPRNVWKDGK MERMSETYAL WARQVAEQEK VPFVDLNDIA AKKTEALGET
RGKSLFFDAA HTNKEGAILN AEAVTEGLRA LKGTDIQKYL K
//
