ID E4SDD5_CALK2 Unreviewed; 401 AA.
AC E4SDD5;
DT 08-FEB-2011, integrated into UniProtKB/TrEMBL.
DT 08-FEB-2011, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE SubName: Full=Diguanylate cyclase with GAF sensor {ECO:0000313|EMBL:ADQ45744.1};
GN OrderedLocusNames=Calkro_0871 {ECO:0000313|EMBL:ADQ45744.1};
OS Caldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 / 2002).
OC Bacteria; Bacillota; Clostridia; Caldicellulosiruptorales;
OC Caldicellulosiruptoraceae; Caldicellulosiruptor.
OX NCBI_TaxID=632348 {ECO:0000313|EMBL:ADQ45744.1, ECO:0000313|Proteomes:UP000006835};
RN [1]
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=2002;
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M.,
RA Hauser L., Jeffries C., Kyrpides N., Ivanova N., Mikhailova N.,
RA Blumer-Schuette S.E., Kelly R.M., Woyke T.;
RT "Complete sequence of Caldicellulosiruptor kronotskyensis 2002.";
RL Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ADQ45744.1, ECO:0000313|Proteomes:UP000006835}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 18902 / VKM B-2412 / 2002
RC {ECO:0000313|Proteomes:UP000006835};
RX PubMed=21216991; DOI=10.1128/JB.01515-10;
RA Blumer-Schuette S.E., Ozdemir I., Mistry D., Lucas S., Lapidus A.,
RA Cheng J.F., Goodwin L.A., Pitluck S., Land M.L., Hauser L.J., Woyke T.,
RA Mikhailova N., Pati A., Kyrpides N.C., Ivanova N., Detter J.C.,
RA Walston-Davenport K., Han S., Adams M.W., Kelly R.M.;
RT "Complete genome sequences for the anaerobic, extremely thermophilic plant
RT biomass-degrading bacteria Caldicellulosiruptor hydrothermalis,
RT Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor kronotskyensis,
RT Caldicellulosiruptor owensenis, and Caldicellulosiruptor lactoaceticus.";
RL J. Bacteriol. 193:1483-1484(2011).
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DR EMBL; CP002330; ADQ45744.1; -; Genomic_DNA.
DR RefSeq; WP_013429885.1; NC_014720.1.
DR AlphaFoldDB; E4SDD5; -.
DR KEGG; ckn:Calkro_0871; -.
DR PATRIC; fig|632348.3.peg.927; -.
DR HOGENOM; CLU_709188_0_0_9; -.
DR OrthoDB; 9783388at2; -.
DR Proteomes; UP000006835; Chromosome.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR CDD; cd01949; GGDEF; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR PANTHER; PTHR45138:SF30; DIGUANYLATE CYCLASE DGCZ; 1.
DR PANTHER; PTHR45138; REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM; 1.
DR Pfam; PF13185; GAF_2; 1.
DR Pfam; PF00990; GGDEF; 1.
DR SMART; SM00065; GAF; 1.
DR SMART; SM00267; GGDEF; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR PROSITE; PS50887; GGDEF; 1.
PE 4: Predicted;
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204}.
FT DOMAIN 270..401
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
SQ SEQUENCE 401 AA; 46371 MW; 7FB968408E92BC17 CRC64;
MIEYNNPQDL KRLIRKLNKI GITISREKNV DTILEMILNE SIDITNSDGG TLYIVKEFEG
QKYLVITLSK NYSVDFNYIG YKIPIDNQSI VGYVAQNGIP VTINNIQNIQ NSHLQQFKLF
DQALHYKTLN LMAIPMIDYQ GNVIGVLQII NKKKDNSIKL TEDNIYQNIV DFTKEDEEII
LSLASQASLL IERIHLYQRI EKNIANTRYA LISLFNSMKQ VIANLSEDIL IEQEEFKKYA
SLDDLTGLFT RNEGMIYLEK QIQLSKMNET HFVVCFIDVD GLKQVNDTFG HQIGDELLKS
FAQILKESIR SYDIAFRYGG DEFVLILYKA TIREANIVLT RIQNKIDEFN AKVQKPYKIQ
ISYGFAEYSP TSNLNSEDLI KIADENMYKV KKEKKKSRPS Y
//
