ID E4SGP2_CALK2 Unreviewed; 507 AA.
AC E4SGP2;
DT 08-FEB-2011, integrated into UniProtKB/TrEMBL.
DT 08-FEB-2011, sequence version 1.
DT 27-MAR-2024, entry version 51.
DE SubName: Full=Peptidoglycan-binding lysin domain {ECO:0000313|EMBL:ADQ46917.1};
GN OrderedLocusNames=Calkro_2074 {ECO:0000313|EMBL:ADQ46917.1};
OS Caldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 / 2002).
OC Bacteria; Bacillota; Clostridia; Caldicellulosiruptorales;
OC Caldicellulosiruptoraceae; Caldicellulosiruptor.
OX NCBI_TaxID=632348 {ECO:0000313|EMBL:ADQ46917.1, ECO:0000313|Proteomes:UP000006835};
RN [1]
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=2002;
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M.,
RA Hauser L., Jeffries C., Kyrpides N., Ivanova N., Mikhailova N.,
RA Blumer-Schuette S.E., Kelly R.M., Woyke T.;
RT "Complete sequence of Caldicellulosiruptor kronotskyensis 2002.";
RL Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ADQ46917.1, ECO:0000313|Proteomes:UP000006835}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 18902 / VKM B-2412 / 2002
RC {ECO:0000313|Proteomes:UP000006835};
RX PubMed=21216991; DOI=10.1128/JB.01515-10;
RA Blumer-Schuette S.E., Ozdemir I., Mistry D., Lucas S., Lapidus A.,
RA Cheng J.F., Goodwin L.A., Pitluck S., Land M.L., Hauser L.J., Woyke T.,
RA Mikhailova N., Pati A., Kyrpides N.C., Ivanova N., Detter J.C.,
RA Walston-Davenport K., Han S., Adams M.W., Kelly R.M.;
RT "Complete genome sequences for the anaerobic, extremely thermophilic plant
RT biomass-degrading bacteria Caldicellulosiruptor hydrothermalis,
RT Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor kronotskyensis,
RT Caldicellulosiruptor owensenis, and Caldicellulosiruptor lactoaceticus.";
RL J. Bacteriol. 193:1483-1484(2011).
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DR EMBL; CP002330; ADQ46917.1; -; Genomic_DNA.
DR RefSeq; WP_013430991.1; NC_014720.1.
DR AlphaFoldDB; E4SGP2; -.
DR CAZy; CBM50; Carbohydrate-Binding Module Family 50.
DR KEGG; ckn:Calkro_2074; -.
DR PATRIC; fig|632348.3.peg.2189; -.
DR HOGENOM; CLU_041648_0_0_9; -.
DR OrthoDB; 529831at2; -.
DR Proteomes; UP000006835; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0008234; F:cysteine-type peptidase activity; IEA:UniProtKB-KW.
DR GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR CDD; cd00118; LysM; 2.
DR Gene3D; 3.10.350.10; LysM domain; 2.
DR Gene3D; 2.30.30.40; SH3 Domains; 1.
DR InterPro; IPR012854; Cu_amine_oxidase-like_N.
DR InterPro; IPR018392; LysM_dom.
DR InterPro; IPR036779; LysM_dom_sf.
DR InterPro; IPR036582; Mao_N_sf.
DR InterPro; IPR003646; SH3-like_bac-type.
DR PANTHER; PTHR33734:SF35; LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 1; 1.
DR PANTHER; PTHR33734; LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2; 1.
DR Pfam; PF07833; Cu_amine_oxidN1; 1.
DR Pfam; PF01476; LysM; 2.
DR Pfam; PF08239; SH3_3; 1.
DR SMART; SM00257; LysM; 2.
DR SUPFAM; SSF55383; Copper amine oxidase, domain N; 1.
DR SUPFAM; SSF54106; LysM domain; 2.
DR PROSITE; PS51782; LYSM; 2.
PE 4: Predicted;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022807};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Protease {ECO:0000256|ARBA:ARBA00022670};
KW Thiol protease {ECO:0000256|ARBA:ARBA00022807};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 7..27
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 155..198
FT /note="LysM"
FT /evidence="ECO:0000259|PROSITE:PS51782"
FT DOMAIN 296..340
FT /note="LysM"
FT /evidence="ECO:0000259|PROSITE:PS51782"
SQ SEQUENCE 507 AA; 57071 MW; FD02F0DD25FE855C CRC64;
MKSLLRFWLF VVTIIILSLV IVFPSFASDI QKEEALIFDA NGNPSYITII NKSSVELLSP
YELSRILGGN FAFDPKDYNF LQSKLIVDQN ELIFKLDSNV VTFNGKNFYM DGPMQIIQNR
ICVPYSTFKT YLNLFEFRHY TSGKQMIFKP NGNYIVYSVQ SGDSLWILSQ TFGTSIEAIK
SFNNLTNDTL YVGQKLIVKK VSLNSVQITG TTKWWTYVKA APTSSAQNLF YLTQGQSVNV
IGKQTDFYKI SSPKGTGFVS IWAVDIKQDI SDVSKPSSYF YSYIPVDTSG DYVSYTYYKV
QNGDTIWSIS VKFGIPDYEL MSANNLNQNS YIYAGQTLKV PVHTVAVHSN EFGVEMLDWF
SQGNYVFPIG SVGKFIDIQT GKYFFAKRTM GASHADVETL SFKDTQIMKE IFGGSFTWER
RPFILEINGR RIAVSVSGMP HAGVDGLPYN QNVANRSGGY GYGPNLDTIV NGMDGHFDVY
TFNGLRHKDN QIDPQHQLTV SIAAGLR
//
