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Database: UniProt
Entry: E4Z3A2_OIKDI
LinkDB: E4Z3A2_OIKDI
Original site: E4Z3A2_OIKDI 
ID   E4Z3A2_OIKDI            Unreviewed;       250 AA.
AC   E4Z3A2;
DT   08-FEB-2011, integrated into UniProtKB/TrEMBL.
DT   08-FEB-2011, sequence version 1.
DT   03-MAY-2023, entry version 35.
DE   RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
DE   Flags: Fragment;
GN   ORFNames=GSOID_T00025852001 {ECO:0000313|EMBL:CBY42180.1};
OS   Oikopleura dioica (Tunicate).
OC   Eukaryota; Metazoa; Chordata; Tunicata; Appendicularia; Copelata;
OC   Oikopleuridae; Oikopleura.
OX   NCBI_TaxID=34765 {ECO:0000313|EMBL:CBY42180.1};
RN   [1] {ECO:0000313|EMBL:CBY42180.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=21097902; DOI=10.1126/science.1194167;
RA   Denoeud F., Henriet S., Mungpakdee S., Aury J.M., Da Silva C.,
RA   Brinkmann H., Mikhaleva J., Olsen L.C., Jubin C., Canestro C.,
RA   Bouquet J.M., Danks G., Poulain J., Campsteijn C., Adamski M., Cross I.,
RA   Yadetie F., Muffato M., Louis A., Butcher S., Tsagkogeorga G., Konrad A.,
RA   Singh S., Jensen M.F., Cong E.H., Eikeseth-Otteraa H., Noel B.,
RA   Anthouard V., Porcel B.M., Kachouri-Lafond R., Nishino A., Ugolini M.,
RA   Chourrout P., Nishida H., Aasland R., Huzurbazar S., Westhof E., Delsuc F.,
RA   Lehrach H., Reinhardt R., Weissenbach J., Roy S.W., Artiguenave F.,
RA   Postlethwait J.H., Manak J.R., Thompson E.M., Jaillon O., Du Pasquier L.,
RA   Boudinot P., Liberles D.A., Volff J.N., Philippe H., Lenhard B.,
RA   Roest Crollius H., Wincker P., Chourrout D.;
RT   "Plasticity of animal genome architecture unmasked by rapid evolution of a
RT   pelagic tunicate.";
RL   Science 330:1381-1385(2010).
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DR   EMBL; FN656933; CBY42180.1; -; Genomic_DNA.
DR   AlphaFoldDB; E4Z3A2; -.
DR   Proteomes; UP000011014; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:InterPro.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006397; P:mRNA processing; IEA:InterPro.
DR   Gene3D; 3.30.70.330; -; 1.
DR   InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR   InterPro; IPR035979; RBD_domain_sf.
DR   InterPro; IPR006509; RBM39_SF.
DR   InterPro; IPR000504; RRM_dom.
DR   PANTHER; PTHR48036:SF6; RNA-BINDING MOTIF PROTEIN 39A-RELATED; 1.
DR   PANTHER; PTHR48036; SPLICING FACTOR (PAD-1), PUTATIVE (AFU_ORTHOLOGUE AFUA_1G15810)-RELATED; 1.
DR   Pfam; PF00076; RRM_1; 1.
DR   SMART; SM00360; RRM; 1.
DR   SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR   PROSITE; PS50102; RRM; 1.
PE   4: Predicted;
KW   RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT   DOMAIN          130..206
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
FT   REGION          1..119
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..28
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        38..57
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        65..119
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   NON_TER         250
FT                   /evidence="ECO:0000313|EMBL:CBY42180.1"
SQ   SEQUENCE   250 AA;  29128 MW;  C9A40F1E11F792CE CRC64;
     MGFESDVKEY HRRAGRKPDE DDADRPRPSQ RQGPFQPRQM RVKKEEPEVD FRTRMKNLTK
     TAAKTHSWIK KEDPDKPVKV KKERRRKSYD SFSEDSEEED RRLTRKAKKK LGLSDSDEEL
     ELSARERDAR TVIAMQLAHA IREFDLKDFF SSVGDVRAVK LIKDERHKTQ GLAYIEFKHV
     QSVPLAMGLT GQRVLGRAIV VHHAQADKNR HSEKLEQAKK NLMKAGTGPY KIRVDKLHKT
     VTEEQLKMIM
//
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