ID   E5FDQ1_9BACT            Unreviewed;       414 AA.
AC   E5FDQ1;
DT   08-FEB-2011, integrated into UniProtKB/TrEMBL.
DT   08-FEB-2011, sequence version 1.
DT   27-MAR-2024, entry version 30.
DE   RecName: Full=DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418};
DE            EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418};
DE   Flags: Fragment;
OS   uncultured bacterium.
OC   Bacteria; environmental samples.
OX   NCBI_TaxID=77133 {ECO:0000313|EMBL:ADQ73783.1};
RN   [1] {ECO:0000313|EMBL:ADQ73783.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Shu Q., Jiao N.;
RT   "A novel culture-independent rpoB gene approach to decipher unique
RT   microbial diversity characteristics in environmental samples.";
RL   Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; HM445842; ADQ73783.1; -; Genomic_DNA.
DR   AlphaFoldDB; E5FDQ1; -.
DR   GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR   Gene3D; 1.10.132.30; -; 1.
DR   Gene3D; 1.10.40.90; -; 1.
DR   Gene3D; 2.40.40.20; -; 1.
DR   Gene3D; 1.10.274.100; RNA polymerase Rpb1, domain 3; 2.
DR   InterPro; IPR045867; DNA-dir_RpoC_beta_prime.
DR   InterPro; IPR000722; RNA_pol_asu.
DR   InterPro; IPR006592; RNA_pol_N.
DR   InterPro; IPR007066; RNA_pol_Rpb1_3.
DR   InterPro; IPR042102; RNA_pol_Rpb1_3_sf.
DR   InterPro; IPR007083; RNA_pol_Rpb1_4.
DR   InterPro; IPR038120; Rpb1_funnel_sf.
DR   PANTHER; PTHR19376; DNA-DIRECTED RNA POLYMERASE; 1.
DR   PANTHER; PTHR19376:SF54; DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA; 1.
DR   Pfam; PF00623; RNA_pol_Rpb1_2; 2.
DR   Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR   Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR   SMART; SM00663; RPOLA_N; 1.
DR   SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE   4: Predicted;
KW   DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW   Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT   DOMAIN          1..187
FT                   /note="RNA polymerase N-terminal"
FT                   /evidence="ECO:0000259|SMART:SM00663"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:ADQ73783.1"
FT   NON_TER         414
FT                   /evidence="ECO:0000313|EMBL:ADQ73783.1"
SQ   SEQUENCE   414 AA;  46246 MW;  CB1B7E73ADA98555 CRC64;
     TDMIKGKQGR FRQNLLGKRV DFSGRSVIVT GPELKLHQCG LPKKMALELF KPFIYSRLEA
     KGLSSTVKQA KKLVEKERPE VWDILDEVIR EHPVLLNRAP TLHRLGIQAF EPTLIEGKAI
     QLHPLVCSAF NADFDGDQMA VHVPLSLEAQ LEARVLMMST NNVLSPANGA PIIVPSQDMI
     LGLYYVSIAR DGMKGEGMAF SSIEEVEHAL NAGEVHLHSN ITCRVKQIDE EGNEIWKRYD
     TTPGRVRLGA LLPLNAKAPF DLVNGLLRKR DVQKVIDTVY RYCGQKESVI FCDQIMSMGF
     KEAFKAGISF GKDDMVIPDS KWSIVEETRD QVKDFEQQYM DGPITQGEKY NKVVDAWSKC
     NDKVTEAMMS TISANRVEDG VEQEPNSVYM MAHSGARGSV TQMKQLGGMR GLMA
//