ID E5FDV3_9BACT Unreviewed; 420 AA.
AC E5FDV3;
DT 08-FEB-2011, integrated into UniProtKB/TrEMBL.
DT 08-FEB-2011, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE RecName: Full=DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418};
DE EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418};
DE Flags: Fragment;
OS uncultured bacterium.
OC Bacteria; environmental samples.
OX NCBI_TaxID=77133 {ECO:0000313|EMBL:ADQ73835.1};
RN [1] {ECO:0000313|EMBL:ADQ73835.1}
RP NUCLEOTIDE SEQUENCE.
RA Shu Q., Jiao N.;
RT "A novel culture-independent rpoB gene approach to decipher unique
RT microbial diversity characteristics in environmental samples.";
RL Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; HM445894; ADQ73835.1; -; Genomic_DNA.
DR AlphaFoldDB; E5FDV3; -.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR Gene3D; 1.10.132.30; -; 1.
DR Gene3D; 1.10.40.90; -; 1.
DR Gene3D; 2.40.40.20; -; 1.
DR Gene3D; 1.10.274.100; RNA polymerase Rpb1, domain 3; 1.
DR InterPro; IPR045867; DNA-dir_RpoC_beta_prime.
DR InterPro; IPR000722; RNA_pol_asu.
DR InterPro; IPR006592; RNA_pol_N.
DR InterPro; IPR007066; RNA_pol_Rpb1_3.
DR InterPro; IPR042102; RNA_pol_Rpb1_3_sf.
DR InterPro; IPR007083; RNA_pol_Rpb1_4.
DR InterPro; IPR038120; Rpb1_funnel_sf.
DR PANTHER; PTHR19376; DNA-DIRECTED RNA POLYMERASE; 1.
DR PANTHER; PTHR19376:SF54; DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA; 1.
DR Pfam; PF00623; RNA_pol_Rpb1_2; 2.
DR Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR SMART; SM00663; RPOLA_N; 1.
DR SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE 4: Predicted;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 1..187
FT /note="RNA polymerase N-terminal"
FT /evidence="ECO:0000259|SMART:SM00663"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ADQ73835.1"
FT NON_TER 420
FT /evidence="ECO:0000313|EMBL:ADQ73835.1"
SQ SEQUENCE 420 AA; 46459 MW; C87E6D49CD0FF27C CRC64;
TDMIKGKQGR FRQNLLGKRV DYSGRSVIVT GPTLKLHQCG LPKKMALELF KPFIFGKLEL
RGLASTIKAA KKMVEREPPE VWDILAEVIR EHPVLLNRAP TLHRLGIQAF EPVLIEGKAI
QLHPLVCAAY NADFDGDQMA VHVPLTLEAQ LEARALMMST NNILSPASGD PIIVPSQDVV
LGLYYMTRDR VNANGEGMSF ADTEEVQRAY GSGRVELHAR VKVRIHETLM NLGEETIEQT
RIVETTVGRA LLWDIVPAGL SFDLINQPMV KKAISRVINQ CYRAVGLKST VIFADQLMYT
GYEYSTRSGA SIGVNDFAIP DAKAELIARA EGEVAEIEQQ YGAGLVTQGE KYNKVIDIWS
RTNDQVSKSM MAGLSKETVT NRDGEEEEQD SFNSVYMYAD SGARGSPAQI RQLAGMRGLM
//
