ID E5SB71_TRISP Unreviewed; 587 AA.
AC E5SB71;
DT 08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT 08-MAR-2011, sequence version 1.
DT 24-JAN-2024, entry version 52.
DE SubName: Full=Transcription factor SOX-6 {ECO:0000313|EMBL:KRY36153.1};
GN Name=SOX6 {ECO:0000313|EMBL:KRY36153.1};
GN ORFNames=T01_8353 {ECO:0000313|EMBL:KRY36153.1};
OS Trichinella spiralis (Trichina worm).
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=6334 {ECO:0000313|EMBL:KRY36153.1, ECO:0000313|Proteomes:UP000054776};
RN [1] {ECO:0000313|EMBL:KRY36153.1, ECO:0000313|Proteomes:UP000054776}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS3 {ECO:0000313|EMBL:KRY36153.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRY36153.1}.
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DR EMBL; JYDH01000045; KRY36153.1; -; Genomic_DNA.
DR RefSeq; XP_003376733.1; XM_003376685.1.
DR AlphaFoldDB; E5SB71; -.
DR STRING; 6334.E5SB71; -.
DR EnsemblMetazoa; EFV58022; EFV58022; EFV58022.
DR GeneID; 10904660; -.
DR KEGG; tsp:Tsp_00998; -.
DR CTD; 10904660; -.
DR eggNOG; KOG0528; Eukaryota.
DR HOGENOM; CLU_464898_0_0_1; -.
DR InParanoid; E5SB71; -.
DR OrthoDB; 2902801at2759; -.
DR Proteomes; UP000054776; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-UniRule.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd22042; HMG-box_EGL13-like; 1.
DR Gene3D; 1.10.30.10; High mobility group box domain; 1.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR PANTHER; PTHR45789; FI18025P1; 1.
DR PANTHER; PTHR45789:SF2; FI18025P1; 1.
DR Pfam; PF00505; HMG_box; 1.
DR SMART; SM00398; HMG; 1.
DR SUPFAM; SSF47095; HMG-box; 1.
DR PROSITE; PS50118; HMG_BOX_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU00267}; Nucleus {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Reference proteome {ECO:0000313|Proteomes:UP000054776}.
FT DOMAIN 413..481
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DNA_BIND 413..481
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT REGION 148..182
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 386..409
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 167..182
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 587 AA; 64469 MW; C37A85D3598C130B CRC64;
MLSIACPTPT RVHRTHNQVE EDRLHLISGS SPSLSTSSCS PVDCSTASSS TSNGVLENDS
CSPKAAVLRK LPATTSGISD VRHENIYPDL FLHTKRQGLV PLVDGNYLTE VLHCCSDWKE
RLSVLDNLIL QVEDIKNKIY ADAIKVDTNP DSETTSGEEQ SKTEHLPHVR NIQSPSSMQD
VNSRSPMGMG INMTLPNVVG SIQGQITVEN DCSNAIANSH FFFQEQQRLM AAAAISSFPS
YPVHSLTSLT TFPPANPLML IGGCDPLFAA SFASTLAAAA ANATTGNNSY KASQSSSASS
VTAPTVNADF PLNLSRPKAP ASSNIEIKRN GSLLKNRSSD IMNQNAIPTC ANAKRHCDNG
LSESPKEHLL LVTCNENQHN NAHKVTGTSF GQRIGSKTPP IRQGLVSRSP DHIKRPMNAF
MVWARDERRK MLKSCPDMHN SNISKILGER WKSMSSDEKQ PYYEEQSRLS KLHMQQHPNY
RYNNIFCLSS VTSLQSVFLR PRPKRTCIVD GKRVRLSEYK QLLRTKQASW SAMNAGMTVL
SATSNLDVSA SDISDTSEHA NIYQIVMKLR FTLTILFDGY LGKKANA
//
