ID E6K878_9BACT Unreviewed; 711 AA.
AC E6K878;
DT 08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT 08-MAR-2011, sequence version 1.
DT 27-MAR-2024, entry version 47.
DE SubName: Full=Tex-like protein N-terminal domain protein {ECO:0000313|EMBL:EFU30378.1};
GN Name=yhgF {ECO:0000313|EMBL:EFU30378.1};
GN ORFNames=HMPREF6485_1657 {ECO:0000313|EMBL:EFU30378.1};
OS Segatella buccae ATCC 33574.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae;
OC Segatella.
OX NCBI_TaxID=873513 {ECO:0000313|EMBL:EFU30378.1, ECO:0000313|Proteomes:UP000003112};
RN [1] {ECO:0000313|EMBL:EFU30378.1, ECO:0000313|Proteomes:UP000003112}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 33574 {ECO:0000313|EMBL:EFU30378.1,
RC ECO:0000313|Proteomes:UP000003112};
RA Muzny D., Qin X., Deng J., Jiang H., Liu Y., Qu J., Song X.-Z., Zhang L.,
RA Thornton R., Coyle M., Francisco L., Jackson L., Javaid M., Korchina V.,
RA Kovar C., Mata R., Mathew T., Ngo R., Nguyen L., Nguyen N., Okwuonu G.,
RA Ongeri F., Pham C., Simmons D., Wilczek-Boney K., Hale W., Jakkamsetti A.,
RA Pham P., Ruth R., San Lucas F., Warren J., Zhang J., Zhao Z., Zhou C.,
RA Zhu D., Lee S., Bess C., Blankenburg K., Forbes L., Fu Q., Gubbala S.,
RA Hirani K., Jayaseelan J.C., Lara F., Munidasa M., Palculict T., Patil S.,
RA Pu L.-L., Saada N., Tang L., Weissenberger G., Zhu Y., Hemphill L.,
RA Shang Y., Youmans B., Ayvaz T., Ross M., Santibanez J., Aqrawi P.,
RA Gross S., Joshi V., Fowler G., Nazareth L., Reid J., Worley K.,
RA Petrosino J., Highlander S., Gibbs R.;
RL Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EFU30378.1}.
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DR EMBL; AEPD01000028; EFU30378.1; -; Genomic_DNA.
DR RefSeq; WP_004345738.1; NZ_GL586311.1.
DR AlphaFoldDB; E6K878; -.
DR STRING; 873513.HMPREF6485_1657; -.
DR eggNOG; COG2183; Bacteria.
DR HOGENOM; CLU_009833_0_2_10; -.
DR Proteomes; UP000003112; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000003112}.
FT DOMAIN 638..707
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 711 AA; 79525 MW; C4EA5BA32DA997BB CRC64;
MNRFTDNIAT RLAFAPHSVE NTLALLDEGC TIPFISRYRK ERTGNLDEVQ IARISELYDK
LKELAKRKET ILKTIEEQGQ LTDTLQKRID DCWDTGELED LYLPYKPKRH TRARIAREQG
LEPLATLLLL QRELYPEQAA ERFVKGEVKD AKAALKGAQD IIAETVSEDE RARKAVRGIY
RREAVITSKV VAKMKEEEKA RKFSDYFDWS EPLKRCSSHR LLAMRRGEAE GVLRVTISAD
DGQCTDKLSK LFVRGRGACQ HLLDEAVEDA YKRLIKPSME TEFAGLSKER ADEEAVRVFA
ENLRQLLLAA PLGQKRVLGV DPGFRTGCKV VCLDGQGNLL HHEVIKPHPP VGDVAGAARQ
VLRMVENFRL EAVAIGNGTA SRETNDFIHS LDFGRKVQIF VVSEDGASVY SASETAREEF
PNEDVTVRGA VSIGRRLMDP LAELVKIDPK SIGVGQYQHD VDQSLLKKSL DTTVELCVNS
VGVNLNTASS HLLTYVSGLG PALARNIVDY RRKNGPFTSR AQLKKVPRLG PTAYQQCAGF
LRIPDAKNPL DNSGVHPESY KLVEQMAKDS GCSVTDLMKD AERRKRINLN CYVTTEVGMP
TLTDIMRELE KPGLDPRGPI ETFEFDTNVH TPEDLCPGMV LPGIVTNITN FGAFVDIGVH
QDGLVHISQL ADRYVSDPNE VVQVHCHVRV KVVEVDLRRH RISLTMRGVE Q
//
