ID E6MR53_9BACT Unreviewed; 292 AA.
AC E6MR53;
DT 08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT 08-MAR-2011, sequence version 1.
DT 27-MAR-2024, entry version 51.
DE SubName: Full=TIGR00255 family protein {ECO:0000313|EMBL:EFV03883.1};
GN ORFNames=HMPREF9420_1971 {ECO:0000313|EMBL:EFV03883.1};
OS Segatella salivae DSM 15606.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae;
OC Segatella.
OX NCBI_TaxID=888832 {ECO:0000313|EMBL:EFV03883.1, ECO:0000313|Proteomes:UP000003874};
RN [1] {ECO:0000313|EMBL:EFV03883.1, ECO:0000313|Proteomes:UP000003874}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 15606 {ECO:0000313|EMBL:EFV03883.1,
RC ECO:0000313|Proteomes:UP000003874};
RA Muzny D., Qin X., Deng J., Jiang H., Liu Y., Qu J., Song X.-Z., Zhang L.,
RA Thornton R., Coyle M., Francisco L., Jackson L., Javaid M., Korchina V.,
RA Kovar C., Mata R., Mathew T., Ngo R., Nguyen L., Nguyen N., Okwuonu G.,
RA Ongeri F., Pham C., Simmons D., Wilczek-Boney K., Hale W., Jakkamsetti A.,
RA Pham P., Ruth R., San Lucas F., Warren J., Zhang J., Zhao Z., Zhou C.,
RA Zhu D., Lee S., Bess C., Blankenburg K., Forbes L., Fu Q., Gubbala S.,
RA Hirani K., Jayaseelan J.C., Lara F., Munidasa M., Palculict T., Patil S.,
RA Pu L.-L., Saada N., Tang L., Weissenberger G., Zhu Y., Hemphill L.,
RA Shang Y., Youmans B., Ayvaz T., Ross M., Santibanez J., Aqrawi P.,
RA Gross S., Joshi V., Fowler G., Nazareth L., Reid J., Worley K.,
RA Petrosino J., Highlander S., Gibbs R.;
RL Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=a divalent metal cation; Xref=ChEBI:CHEBI:60240;
CC Evidence={ECO:0000256|ARBA:ARBA00001968};
CC -!- SIMILARITY: Belongs to the YicC/YloC family.
CC {ECO:0000256|ARBA:ARBA00035648}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EFV03883.1}.
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DR EMBL; AEQO01000161; EFV03883.1; -; Genomic_DNA.
DR RefSeq; WP_007135221.1; NZ_GL629647.1.
DR AlphaFoldDB; E6MR53; -.
DR STRING; 888832.HMPREF9420_1971; -.
DR eggNOG; COG1561; Bacteria.
DR HOGENOM; CLU_076609_1_0_10; -.
DR OrthoDB; 9771229at2; -.
DR Proteomes; UP000003874; Unassembled WGS sequence.
DR GO; GO:0004521; F:RNA endonuclease activity; IEA:InterPro.
DR InterPro; IPR013551; YicC-like_C.
DR InterPro; IPR013527; YicC-like_N.
DR InterPro; IPR005229; YicC/YloC-like.
DR NCBIfam; TIGR00255; YicC/YloC family endoribonuclease; 1.
DR PANTHER; PTHR30636; UNCHARACTERIZED; 1.
DR PANTHER; PTHR30636:SF3; UPF0701 PROTEIN YICC; 1.
DR Pfam; PF08340; DUF1732; 1.
DR Pfam; PF03755; YicC_N; 1.
PE 3: Inferred from homology;
KW Endonuclease {ECO:0000256|ARBA:ARBA00022759};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000003874}.
FT DOMAIN 2..156
FT /note="Endoribonuclease YicC-like N-terminal"
FT /evidence="ECO:0000259|Pfam:PF03755"
FT DOMAIN 207..290
FT /note="Endoribonuclease YicC-like C-terminal"
FT /evidence="ECO:0000259|Pfam:PF08340"
SQ SEQUENCE 292 AA; 33450 MW; 20359B1B8B89AFCD CRC64;
MIQSMTGYGK AVVTFKEKKI NVEIKSLNSK ALDLSARIAP LYREKEMDIR QKVAKSLERG
KVDFAIWIEK DDVVDAASIN AALVENYYKQ IKDISLQTGI PEPTDWYATL LALPDITTKT
ENEELTNEEW AVASTAIDEA LHALVDFRKQ EGAALQHKFN EKINNIEALL ASIEPYEKSR
VEKIRQNIIK SLEQIPSVDY DKNRLEQELI YYIEKLDISE EKQRLTNHLN YFRETMQEEG
HGVGKKLGFI AQEMGREINT TGSKSNQAEM QNIVVKMKDE LEQIKEQVLN AL
//
