GenomeNet

Database: UniProt
Entry: E6V1V3_VARPE
LinkDB: E6V1V3_VARPE
Original site: E6V1V3_VARPE 
ID   E6V1V3_VARPE            Unreviewed;       158 AA.
AC   E6V1V3;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   24-JAN-2024, entry version 62.
DE   SubName: Full=Transcriptional regulator, MarR family {ECO:0000313|EMBL:ADU37956.1};
GN   OrderedLocusNames=Varpa_3774 {ECO:0000313|EMBL:ADU37956.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU37956.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA   Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N.,
RA   Ivanova N., Ovchinnikova G., Orwin P., Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU37956.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU37956.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium Variovorax
RT   paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-e00813(2013).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP002417; ADU37956.1; -; Genomic_DNA.
DR   RefSeq; WP_013542179.1; NC_014931.1.
DR   AlphaFoldDB; E6V1V3; -.
DR   STRING; 595537.Varpa_3774; -.
DR   KEGG; vpe:Varpa_3774; -.
DR   eggNOG; COG1846; Bacteria.
DR   HOGENOM; CLU_083287_3_0_4; -.
DR   OMA; LNRDVRH; -.
DR   OrthoDB; 9806864at2; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR000835; HTH_MarR-typ.
DR   InterPro; IPR039422; MarR/SlyA-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   PANTHER; PTHR33164:SF5; ORGANIC HYDROPEROXIDE RESISTANCE TRANSCRIPTIONAL REGULATOR; 1.
DR   PANTHER; PTHR33164; TRANSCRIPTIONAL REGULATOR, MARR FAMILY; 1.
DR   Pfam; PF01047; MarR; 1.
DR   PRINTS; PR00598; HTHMARR.
DR   SMART; SM00347; HTH_MARR; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR   PROSITE; PS50995; HTH_MARR_2; 1.
PE   4: Predicted;
FT   DOMAIN          22..152
FT                   /note="HTH marR-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50995"
SQ   SEQUENCE   158 AA;  17671 MW;  C3D863EE8A186132 CRC64;
     MPSKHLPAQP ADAPVSDPLA LDEQLCFAVY STMLSLNKVY RGLLRDLDLT YLQYLVMLVL
     WEKDSVNVSE ICKRLALETT TLTPLLKRLE ARGLIQRVRS ASDERQVIVS LTTEGRAMHK
     EARALPACVA EAMALEPQDI GNLRDQLLAL RSNLDRNA
//
DBGET integrated database retrieval system