ID E6V4R4_VARPE Unreviewed; 236 AA.
AC E6V4R4;
DT 08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT 08-MAR-2011, sequence version 1.
DT 27-MAR-2024, entry version 57.
DE SubName: Full=Transcriptional regulator, XRE family {ECO:0000313|EMBL:ADU37000.1};
GN OrderedLocusNames=Varpa_2807 {ECO:0000313|EMBL:ADU37000.1};
OS Variovorax paradoxus (strain EPS).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Variovorax.
OX NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU37000.1, ECO:0000313|Proteomes:UP000008917};
RN [1] {ECO:0000313|Proteomes:UP000008917}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N.,
RA Ivanova N., Ovchinnikova G., Orwin P., Han J.-I.G., Woyke T.;
RT "Complete sequence of Variovorax paradoxus EPS.";
RL Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ADU37000.1, ECO:0000313|Proteomes:UP000008917}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=EPS {ECO:0000313|EMBL:ADU37000.1,
RC ECO:0000313|Proteomes:UP000008917};
RX PubMed=24158554;
RA Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT "Genome of the Root-Associated Plant Growth-Promoting Bacterium Variovorax
RT paradoxus Strain EPS.";
RL Genome Announc. 1:e00843-e00813(2013).
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DR EMBL; CP002417; ADU37000.1; -; Genomic_DNA.
DR AlphaFoldDB; E6V4R4; -.
DR STRING; 595537.Varpa_2807; -.
DR MEROPS; S24.A20; -.
DR KEGG; vpe:Varpa_2807; -.
DR eggNOG; COG1974; Bacteria.
DR HOGENOM; CLU_066192_1_3_4; -.
DR OrthoDB; 9021722at2; -.
DR Proteomes; UP000008917; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR CDD; cd06529; S24_LexA-like; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR Gene3D; 2.10.109.10; Umud Fragment, subunit A; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR039418; LexA-like.
DR InterPro; IPR036286; LexA/Signal_pep-like_sf.
DR InterPro; IPR015927; Peptidase_S24_S26A/B/C.
DR PANTHER; PTHR40661; -; 1.
DR PANTHER; PTHR40661:SF3; FELS-1 PROPHAGE TRANSCRIPTIONAL REGULATOR-RELATED; 1.
DR Pfam; PF13560; HTH_31; 1.
DR Pfam; PF00717; Peptidase_S24; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF51306; LexA/Signal peptidase; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 4: Predicted;
FT DOMAIN 9..61
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 236 AA; 26043 MW; F22A376DCC989BD7 CRC64;
METIAKRAKA AREYAKLTQK QAEVVSGVKQ ASISKIERGA TIRTGGLLAL ARAYRADPNW
LDTGDGPAPW DPIQIRQAQH QANEPAAIYR VVRVPPELPY FKPGTPDTVP LISWSQAANW
EIAGKHTTDR WIPCIAHHSP EKTYALRVDG DSMAAASGEL KSYPEGSIIF VDTNLKTPAD
GERVIALVTE GGKLTFKEFK EQDGPRWLLP LNPKHEPIRT AFVVLGTVIG KWEDED
//
