GenomeNet

Database: UniProt
Entry: E6VBI2_VARPE
LinkDB: E6VBI2_VARPE
Original site: E6VBI2_VARPE 
ID   E6VBI2_VARPE            Unreviewed;       209 AA.
AC   E6VBI2;
DT   08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT   08-MAR-2011, sequence version 1.
DT   24-JAN-2024, entry version 52.
DE   SubName: Full=DNA polymerase beta domain protein region {ECO:0000313|EMBL:ADU39782.1};
GN   OrderedLocusNames=Varpa_5629 {ECO:0000313|EMBL:ADU39782.1};
OS   Variovorax paradoxus (strain EPS).
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=595537 {ECO:0000313|EMBL:ADU39782.1, ECO:0000313|Proteomes:UP000008917};
RN   [1] {ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|Proteomes:UP000008917};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA   Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N.,
RA   Ivanova N., Ovchinnikova G., Orwin P., Han J.-I.G., Woyke T.;
RT   "Complete sequence of Variovorax paradoxus EPS.";
RL   Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADU39782.1, ECO:0000313|Proteomes:UP000008917}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EPS {ECO:0000313|EMBL:ADU39782.1,
RC   ECO:0000313|Proteomes:UP000008917};
RX   PubMed=24158554;
RA   Han J.I., Spain J.C., Leadbetter J.R., Ovchinnikova G., Goodwin L.A.,
RA   Han C.S., Woyke T., Davenport K.W., Orwin P.M.;
RT   "Genome of the Root-Associated Plant Growth-Promoting Bacterium Variovorax
RT   paradoxus Strain EPS.";
RL   Genome Announc. 1:e00843-e00813(2013).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP002417; ADU39782.1; -; Genomic_DNA.
DR   RefSeq; WP_013543977.1; NC_014931.1.
DR   AlphaFoldDB; E6VBI2; -.
DR   STRING; 595537.Varpa_5629; -.
DR   KEGG; vpe:Varpa_5629; -.
DR   eggNOG; COG1708; Bacteria.
DR   HOGENOM; CLU_094593_1_0_4; -.
DR   OMA; NQKHYQA; -.
DR   OrthoDB; 8223306at2; -.
DR   Proteomes; UP000008917; Chromosome.
DR   GO; GO:0016779; F:nucleotidyltransferase activity; IEA:UniProtKB-KW.
DR   CDD; cd05403; NT_KNTase_like; 1.
DR   Gene3D; 3.30.460.10; Beta Polymerase, domain 2; 1.
DR   InterPro; IPR043519; NT_sf.
DR   InterPro; IPR002934; Polymerase_NTP_transf_dom.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF01909; NTP_transf_2; 1.
DR   SUPFAM; SSF81301; Nucleotidyltransferase; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
PE   4: Predicted;
KW   Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW   Transferase {ECO:0000256|ARBA:ARBA00022695}.
FT   DOMAIN          110..166
FT                   /note="Polymerase nucleotidyl transferase"
FT                   /evidence="ECO:0000259|Pfam:PF01909"
SQ   SEQUENCE   209 AA;  22407 MW;  F2439CD592F3FD06 CRC64;
     MSNDSSLMDL LFPAARQRTL AVLLLQPQSA FHLRELARLT DSHAGTLARE VDKLARTGLL
     LRSEQGNQVR YNANTSHPLF DDLAAMFRKT HGVVPAVREV LAPLDAQIRL ALVFGSVARG
     TPSPGSDVDL LVLGSVDFMT LAQAVFPLHA TLGREVNTVL YTPEEFAERA RSGDAFARDI
     LAKPKLLVKG GADELAELAG DRAAAGPSA
//
DBGET integrated database retrieval system