ID E7GJY4_CLOSY Unreviewed; 161 AA.
AC E7GJY4;
DT 05-APR-2011, integrated into UniProtKB/TrEMBL.
DT 05-APR-2011, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE RecName: Full=Putative HNH nuclease YajD {ECO:0000256|ARBA:ARBA00040194};
GN ORFNames=HMPREF9474_01229 {ECO:0000313|EMBL:EGA94878.1};
OS [Clostridium] symbiosum WAL-14163.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae.
OX NCBI_TaxID=742740 {ECO:0000313|EMBL:EGA94878.1, ECO:0000313|Proteomes:UP000002970};
RN [1] {ECO:0000313|EMBL:EGA94878.1, ECO:0000313|Proteomes:UP000002970}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=WAL-14163 {ECO:0000313|EMBL:EGA94878.1,
RC ECO:0000313|Proteomes:UP000002970};
RA Earl A., Ward D., Feldgarden M., Gevers D., Finegold S.M., Summanen P.H.,
RA Molitoris D.R., Vaisanen M.L., Daigneault M., Young S.K., Zeng Q.,
RA Gargeya S., Fitzgerald M., Haas B., Abouelleil A., Alvarado L.,
RA Arachchi H.M., Berlin A., Brown A., Chapman S.B., Chen Z., Dunbar C.,
RA Freedman E., Gearin G., Gellesch M., Goldberg J., Griggs A., Gujja S.,
RA Heilman E., Heiman D., Howarth C., Larson L., Lui A., MacDonald P.J.P.,
RA Mehta T., Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M.,
RA Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S.,
RA White J., Yandava C., Nusbaum C., Birren B.;
RT "The Genome Sequence of Clostridium symbiosum strain WAL-14163.";
RL Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the HNH nuclease family.
CC {ECO:0000256|ARBA:ARBA00038412}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EGA94878.1}.
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DR EMBL; ADLQ01000032; EGA94878.1; -; Genomic_DNA.
DR AlphaFoldDB; E7GJY4; -.
DR STRING; 1512.GCA_900049235_01346; -.
DR eggNOG; COG1403; Bacteria.
DR HOGENOM; CLU_108879_4_2_9; -.
DR Proteomes; UP000002970; Unassembled WGS sequence.
DR GO; GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd00085; HNHc; 1.
DR Gene3D; 1.10.30.50; -; 1.
DR InterPro; IPR002711; HNH.
DR InterPro; IPR003615; HNH_nuc.
DR PANTHER; PTHR41286; HNH NUCLEASE YAJD-RELATED; 1.
DR PANTHER; PTHR41286:SF1; HNH NUCLEASE YAJD-RELATED; 1.
DR Pfam; PF01844; HNH; 1.
DR SMART; SM00507; HNHc; 1.
PE 3: Inferred from homology;
KW Endonuclease {ECO:0000313|EMBL:EGA94878.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000002970}.
FT DOMAIN 91..147
FT /note="HNH nuclease"
FT /evidence="ECO:0000259|SMART:SM00507"
SQ SEQUENCE 161 AA; 19099 MW; 14745CD3706AD6CE CRC64;
MLSLSCEELR EALWKIHGAF FFTFAWTGAS SFHPVRYIGE EMDKMPMKPK KPCRHPGCPN
LTDGIYCEEH RALHCSDWTS SAGRGYDRRW RIARSRFLKT HPLCVRCREQ GRLVKATVVD
HIVPHRGDDR LFWDEENWQA LCKNCHDSKT MTEDRYQEYK Y
//