ID E9FTZ0_DAPPU Unreviewed; 290 AA.
AC E9FTZ0;
DT 05-APR-2011, integrated into UniProtKB/TrEMBL.
DT 05-APR-2011, sequence version 1.
DT 27-MAR-2024, entry version 49.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
DE Flags: Fragment;
GN ORFNames=DAPPUDRAFT_24221 {ECO:0000313|EMBL:EFX89557.1};
OS Daphnia pulex (Water flea).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda;
OC Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia.
OX NCBI_TaxID=6669 {ECO:0000313|EMBL:EFX89557.1, ECO:0000313|Proteomes:UP000000305};
RN [1] {ECO:0000313|EMBL:EFX89557.1, ECO:0000313|Proteomes:UP000000305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=21292972; DOI=10.1126/science.1197761;
RA Colbourne J.K., Pfrender M.E., Gilbert D., Thomas W.K., Tucker A.,
RA Oakley T.H., Tokishita S., Aerts A., Arnold G.J., Basu M.K., Bauer D.J.,
RA Caceres C.E., Carmel L., Casola C., Choi J.H., Detter J.C., Dong Q.,
RA Dusheyko S., Eads B.D., Frohlich T., Geiler-Samerotte K.A., Gerlach D.,
RA Hatcher P., Jogdeo S., Krijgsveld J., Kriventseva E.V., Kultz D.,
RA Laforsch C., Lindquist E., Lopez J., Manak J.R., Muller J., Pangilinan J.,
RA Patwardhan R.P., Pitluck S., Pritham E.J., Rechtsteiner A., Rho M.,
RA Rogozin I.B., Sakarya O., Salamov A., Schaack S., Shapiro H., Shiga Y.,
RA Skalitzky C., Smith Z., Souvorov A., Sung W., Tang Z., Tsuchiya D., Tu H.,
RA Vos H., Wang M., Wolf Y.I., Yamagata H., Yamada T., Ye Y., Shaw J.R.,
RA Andrews J., Crease T.J., Tang H., Lucas S.M., Robertson H.M., Bork P.,
RA Koonin E.V., Zdobnov E.M., Grigoriev I.V., Lynch M., Boore J.L.;
RT "The ecoresponsive genome of Daphnia pulex.";
RL Science 331:555-561(2011).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
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DR EMBL; GL732524; EFX89557.1; -; Genomic_DNA.
DR AlphaFoldDB; E9FTZ0; -.
DR STRING; 6669.E9FTZ0; -.
DR EnsemblMetazoa; EFX89557; EFX89557; DAPPUDRAFT_24221.
DR EnsemblMetazoa; XM_046582267.1; XP_046438223.1; LOC124189797.
DR KEGG; dpx:DAPPUDRAFT_24221; -.
DR eggNOG; KOG0117; Eukaryota.
DR HOGENOM; CLU_022960_4_0_1; -.
DR InParanoid; E9FTZ0; -.
DR OMA; QLWGQQI; -.
DR Proteomes; UP000000305; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR CDD; cd12249; RRM1_hnRNPR_like; 1.
DR CDD; cd12250; RRM2_hnRNPR_like; 1.
DR Gene3D; 3.30.70.330; -; 3.
DR InterPro; IPR006535; HnRNP_R/Q_splicing_fac.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR NCBIfam; TIGR01648; hnRNP-R-Q; 1.
DR PANTHER; PTHR21245:SF8; APOBEC1 COMPLEMENTATION FACTOR; 1.
DR PANTHER; PTHR21245; HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN; 1.
DR Pfam; PF00076; RRM_1; 3.
DR SMART; SM00360; RRM; 3.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR PROSITE; PS50102; RRM; 3.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000305};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 42..120
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 122..204
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 217..289
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EFX89557.1"
FT NON_TER 290
FT /evidence="ECO:0000313|EMBL:EFX89557.1"
SQ SEQUENCE 290 AA; 33624 MW; C9530607DF889B97 CRC64;
KREESLMKLM QETGCEIIQE NGQRKFGGPP PNWEGPPPPK GTEIFVGKLP RDVFEDELYR
IFSTIGPIYE LRLMMDFSGS NRGFAFIQFA HRQDANRAIQ LMDNYELRPR HHIGVVKSID
NCRLFIGGIP KTKSREEIQG EMERLTEGVT KVIVYSSITD KTKNRGFAFV EYINHRAASK
ARRKLIPDRI QLWGKEIAVD WAEPENEIEE DVMSQVTVLY VRNLSLTTTE QVLRELFNRV
SDDNVQKLKM MRDFAFIHFS SREKAEKAMR NMNHTEINGT TIEITWAKPV
//
