GenomeNet

Database: UniProt
Entry: F0C105_9XANT
LinkDB: F0C105_9XANT
Original site: F0C105_9XANT 
ID   F0C105_9XANT            Unreviewed;       316 AA.
AC   F0C105;
DT   03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT   03-MAY-2011, sequence version 1.
DT   24-JAN-2024, entry version 25.
DE   SubName: Full=Transposase, IS4 family {ECO:0000313|EMBL:EGD20795.1};
GN   ORFNames=XGA_0515 {ECO:0000313|EMBL:EGD20795.1}, XGA_0606
GN   {ECO:0000313|EMBL:EGD20709.1};
OS   Xanthomonas hortorum ATCC 19865.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales;
OC   Xanthomonadaceae; Xanthomonas; Xanthomonas hortorum pv. gardneri.
OX   NCBI_TaxID=925777 {ECO:0000313|EMBL:EGD20795.1, ECO:0000313|Proteomes:UP000005023};
RN   [1] {ECO:0000313|EMBL:EGD20795.1, ECO:0000313|Proteomes:UP000005023}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 19865 {ECO:0000313|EMBL:EGD20795.1,
RC   ECO:0000313|Proteomes:UP000005023};
RX   PubMed=21396108; DOI=10.1186/1471-2164-12-146;
RA   Potnis N., Krasileva K., Chow V., Almeida N.F., Patil P.B., Ryan R.P.,
RA   Sharlach M., Behlau F., Dow J.M., Momol M.T., White F.F., Preston J.F.,
RA   Vinatzer B.A., Koebnik R., Setubal J.C., Norman D.J., Staskawicz B.J.,
RA   Jones J.B.;
RT   "Comparative genomics reveals diversity among xanthomonads infecting tomato
RT   and pepper.";
RL   BMC Genomics 12:146-146(2011).
CC   -!- FUNCTION: Involved in the transposition of the insertion sequence IS5.
CC       {ECO:0000256|ARBA:ARBA00003544}.
CC   -!- SIMILARITY: Belongs to the transposase 11 family.
CC       {ECO:0000256|ARBA:ARBA00010075}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EGD20795.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AEQX01000056; EGD20709.1; -; Genomic_DNA.
DR   EMBL; AEQX01000050; EGD20795.1; -; Genomic_DNA.
DR   RefSeq; WP_006448851.1; NZ_AEQX01000056.1.
DR   AlphaFoldDB; F0C105; -.
DR   PATRIC; fig|925777.8.peg.5193; -.
DR   Proteomes; UP000005023; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0004803; F:transposase activity; IEA:InterPro.
DR   GO; GO:0006313; P:DNA transposition; IEA:InterPro.
DR   InterPro; IPR047959; Transpos_IS5.
DR   InterPro; IPR002559; Transposase_11.
DR   InterPro; IPR008490; Transposase_InsH_N.
DR   NCBIfam; NF033581; transpos_IS5_4; 1.
DR   PANTHER; PTHR35604; TRANSPOSASE INSH FOR INSERTION SEQUENCE ELEMENT IS5A-RELATED; 1.
DR   PANTHER; PTHR35604:SF2; TRANSPOSASE INSH FOR INSERTION SEQUENCE ELEMENT IS5A-RELATED; 1.
DR   Pfam; PF01609; DDE_Tnp_1; 1.
DR   Pfam; PF05598; DUF772; 1.
PE   3: Inferred from homology;
KW   DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Transposable element {ECO:0000256|ARBA:ARBA00022464};
KW   Transposition {ECO:0000256|ARBA:ARBA00022578}.
FT   DOMAIN          50..123
FT                   /note="Transposase InsH N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF05598"
FT   DOMAIN          135..310
FT                   /note="Transposase IS4-like"
FT                   /evidence="ECO:0000259|Pfam:PF01609"
SQ   SEQUENCE   316 AA;  35604 MW;  921FD5FC2F3E65DC CRC64;
     MQLTFGDAEG LGKRKQTRRE IFLAEMEQVV PWQHLLGLIA PHYPVSGRPG RQPYALATML
     RIHLLQQWYA LSDPAMEEAL HEIPTLRRFA QLGGLDNVPD ETTILNFRRL LETHGLAARM
     LEAVNAHLAR KGQSLRSGTI VDATLIAAPS STKNADHARD PEMHQTKKGN QWYFGMKAHI
     GVDEFSGLVH HVHCTAANVA DVTVTHTLLH GKEDSVFGDS GYTGADKREE LQTCKAAFFI
     AARPSTTQAI GNKRERAREQ RWEHFKASVR AKVEHPFRVI KCQFGYTKAR YRGLAKNTAH
     VVTLFALSNL WMKRKQ
//
DBGET integrated database retrieval system