ID F0T251_SYNGF Unreviewed; 518 AA.
AC F0T251;
DT 03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 03-MAY-2011, sequence version 1.
DT 24-JAN-2024, entry version 52.
DE SubName: Full=Coproporphyrinogen dehydrogenase {ECO:0000313|EMBL:ADY56395.1};
DE EC=1.3.99.22 {ECO:0000313|EMBL:ADY56395.1};
GN OrderedLocusNames=Sgly_2104 {ECO:0000313|EMBL:ADY56395.1};
OS Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Desulfitobacteriaceae;
OC Syntrophobotulus.
OX NCBI_TaxID=645991 {ECO:0000313|EMBL:ADY56395.1, ECO:0000313|Proteomes:UP000007488};
RN [1] {ECO:0000313|EMBL:ADY56395.1, ECO:0000313|Proteomes:UP000007488}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 8271 / FlGlyR {ECO:0000313|Proteomes:UP000007488};
RX PubMed=21886864;
RA Han C., Mwirichia R., Chertkov O., Held B., Lapidus A., Nolan M., Lucas S.,
RA Hammon N., Deshpande S., Cheng J.F., Tapia R., Goodwin L., Pitluck S.,
RA Huntemann M., Liolios K., Ivanova N., Pagani I., Mavromatis K.,
RA Ovchinikova G., Pati A., Chen A., Palaniappan K., Land M., Hauser L.,
RA Brambilla E.M., Rohde M., Spring S., Sikorski J., Goker M., Woyke T.,
RA Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C.,
RA Klenk H.P., Detter J.C.;
RT "Complete genome sequence of Syntrophobotulus glycolicus type strain
RT (FlGlyR).";
RL Stand. Genomic Sci. 4:371-380(2011).
RN [2] {ECO:0000313|Proteomes:UP000007488}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 8271 / FlGlyR {ECO:0000313|Proteomes:UP000007488};
RA Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S.,
RA Kyrpides N., Mavromatis K., Pagani I., Ivanova N., Mikhailova N.,
RA Chertkov O., Held B., Detter J.C., Tapia R., Han C., Land M., Hauser L.,
RA Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Spring S.,
RA Schroeder M., Brambilla E., Klenk H.-P., Eisen J.A.;
RT "The complete genome of Syntrophobotulus glycolicus DSM 8271.";
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP002547; ADY56395.1; -; Genomic_DNA.
DR RefSeq; WP_013625262.1; NC_015172.1.
DR AlphaFoldDB; F0T251; -.
DR STRING; 645991.Sgly_2104; -.
DR KEGG; sgy:Sgly_2104; -.
DR eggNOG; COG0635; Bacteria.
DR HOGENOM; CLU_029256_1_0_9; -.
DR OMA; GQESIYN; -.
DR OrthoDB; 9808022at2; -.
DR Proteomes; UP000007488; Chromosome.
DR GO; GO:0051536; F:iron-sulfur cluster binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW.
DR CDD; cd01335; Radical_SAM; 1.
DR Gene3D; 3.80.30.20; tm_1862 like domain; 1.
DR InterPro; IPR034505; Coproporphyrinogen-III_oxidase.
DR InterPro; IPR006638; Elp3/MiaA/NifB-like_rSAM.
DR InterPro; IPR023995; HemZ.
DR InterPro; IPR007197; rSAM.
DR InterPro; IPR023404; rSAM_horseshoe.
DR NCBIfam; TIGR03994; rSAM_HemZ; 1.
DR PANTHER; PTHR13932; COPROPORPHYRINIGEN III OXIDASE; 1.
DR PANTHER; PTHR13932:SF1; OXYGEN-INDEPENDENT COPROPORPHYRINOGEN-III OXIDASE-LIKE PROTEIN HEMZ; 1.
DR Pfam; PF04055; Radical_SAM; 1.
DR SFLD; SFLDG01065; anaerobic_coproporphyrinogen-I; 1.
DR SFLD; SFLDG01082; B12-binding_domain_containing; 1.
DR SFLD; SFLDF00310; oxygen-independent_coproporphy; 1.
DR SMART; SM00729; Elp3; 1.
DR SUPFAM; SSF102114; Radical SAM enzymes; 1.
DR PROSITE; PS51918; RADICAL_SAM; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Oxidoreductase {ECO:0000313|EMBL:ADY56395.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000007488}.
FT DOMAIN 186..416
FT /note="Radical SAM core"
FT /evidence="ECO:0000259|PROSITE:PS51918"
SQ SEQUENCE 518 AA; 57872 MW; 7647AA75CBFA213D CRC64;
MTNKIELHGL KVDSQILTNS RALVSAFVQH KNIVVREAGA GKPEEKEYPD SECPAVILIE
AETLTDPGWI RGKWIVENRE TETVLMSAEE IEFLGDLPVA GRETTIQVAV KQVICRLLAR
VTGMMPPWGI MTGIRPGKLV TAMHKLGIPE TDQERVLSRK YLVVPEKIRL LQTVFSVQEP
FQPQTKKQQR FVSLYISVPF CPSRCSYCSF AFAESTGQDS TISGYLSALV REIELAGGLL
TRTSFLVNHL YIGGGTPTVL DSARLEILLK KIKAEIPLAD DVEYTVEAGR PDTMNQEKLL
CLKRYGVNRL SINPQSMNDG TLRAIGRRHT VQDILDCYAL AREIGDWIIN MDIILGLPGE
GPEEVEQTVR AVLSLKPDNL AVHAMSLKRR SKQWEAGAAI NGGVLWQEVQ EGVFRKIQQA
GYGPYYLYRQ KNISGNLENV GFCLPGKEGR YNIAVIEENQ NILGLGAGAC SKIMAEDFAG
HQNIYQPIDV LTYMEGYERV HARRSKLFYS SEIKRNMV
//