ID F0YXJ4_9CLOT Unreviewed; 380 AA.
AC F0YXJ4;
DT 03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 03-MAY-2011, sequence version 1.
DT 24-JAN-2024, entry version 46.
DE SubName: Full=Transcriptional regulator, Cro/CI family {ECO:0000313|EMBL:EGB93682.1};
GN ORFNames=HMPREF0240_01559 {ECO:0000313|EMBL:EGB93682.1};
OS Clostridium sp. D5.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=556261 {ECO:0000313|EMBL:EGB93682.1, ECO:0000313|Proteomes:UP000003978};
RN [1] {ECO:0000313|EMBL:EGB93682.1, ECO:0000313|Proteomes:UP000003978}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=D5 {ECO:0000313|EMBL:EGB93682.1,
RC ECO:0000313|Proteomes:UP000003978};
RG The Broad Institute Genome Sequencing Platform;
RA Ward D., Earl A., Feldgarden M., Gevers D., Young S., Zeng Q., Koehrsen M.,
RA Alvarado L., Berlin A.M., Borenstein D., Chapman S.B., Chen Z., Engels R.,
RA Freedman E., Gellesch M., Goldberg J., Griggs A., Gujja S., Heilman E.R.,
RA Heiman D.I., Hepburn T.A., Howarth C., Jen D., Larson L., Mehta T.,
RA Park D., Pearson M., Richards J., Roberts A., Saif S., Shea T.D.,
RA Shenoy N., Sisk P., Stolte C., Sykes S.N., Walk T., White J., Yandava C.,
RA Sibley C.D., White A.P., Crowley S., Surette M.G., Strauss J.C.,
RA Ambrose C.E., Allen-Vercoe E., Haas B., Nusbaum C., Birren B.;
RT "The Genome Sequence of Clostridium sp. D5.";
RL Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the plasmid replication initiation factor
CC family. {ECO:0000256|ARBA:ARBA00008374}.
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DR EMBL; GL870810; EGB93682.1; -; Genomic_DNA.
DR RefSeq; WP_005336080.1; NZ_GL870810.1.
DR AlphaFoldDB; F0YXJ4; -.
DR GeneID; 78231119; -.
DR eggNOG; COG2946; Bacteria.
DR HOGENOM; CLU_037938_0_0_9; -.
DR OrthoDB; 2067664at2; -.
DR Proteomes; UP000003978; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR003491; REP-like_C.
DR InterPro; IPR040819; Rol_Rep_N.
DR Pfam; PF01381; HTH_3; 1.
DR Pfam; PF02486; Rep_trans; 1.
DR Pfam; PF18106; Rol_Rep_N; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000003978}.
FT DOMAIN 10..97
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 380 AA; 44208 MW; 64BBB79C2588209C CRC64;
MNNLEFALEM KNKRLASGLS QGELASLTHV SRYSINRFEN GKANASKETQ NIILRCLNYY
VCDKPFYLLV DYLSVRFPTT DALEVIRKVL GMKADYFIHY DYGYYGYKEH YAYGEIKVMA
SDDEHMGVFL ELKGAGSRNM EYVLQAQNRD WYSFLNRCLD CGGVIRRFDL AINDMCGLLD
IPVLSEKYKN GGADCRCKNY ENVQGGKLSE KKRNLASTLY IGSKASTKYF CLYEKQKEQA
TKKKHTDIIN RFEIRLRDKK AVQAVEELLL TYNPHGLVFY LITDFVQFPD YPLWEIFISH
DSLPFEMNPV PVNMERTLQW LERQVMPSIV MIEEIDRLTG SNYMKMIDEC THLSEKQEML
VEQMCTDIAD VIESEGVFYE
//
