ID F1MKH0_BOVIN Unreviewed; 359 AA.
AC F1MKH0;
DT 03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 10-APR-2019, sequence version 3.
DT 27-MAR-2024, entry version 72.
DE SubName: Full=LSM11, U7 small nuclear RNA associated {ECO:0000313|Ensembl:ENSBTAP00000013683.6};
GN Name=LSM11 {ECO:0000313|Ensembl:ENSBTAP00000013683.6,
GN ECO:0000313|VGNC:VGNC:54446};
OS Bos taurus (Bovine).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC Bovinae; Bos.
OX NCBI_TaxID=9913 {ECO:0000313|Ensembl:ENSBTAP00000013683.6, ECO:0000313|Proteomes:UP000009136};
RN [1] {ECO:0000313|Ensembl:ENSBTAP00000013683.6, ECO:0000313|Proteomes:UP000009136}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Hereford {ECO:0000313|Ensembl:ENSBTAP00000013683.6,
RC ECO:0000313|Proteomes:UP000009136};
RA Rosen B.D., Bickhart D.M., Koren S., Schnabel R.D., Hall R., Zimin A.,
RA Dreischer C., Schultheiss S., Schroeder S.G., Elsik C.G., Couldrey C.,
RA Liu G.E., Van Tassell C.P., Phillippy A.M., Smith T.P.L., Medrano J.F.;
RT "ARS-UCD1.2.";
RL Submitted (MAR-2018) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSBTAP00000013683.6}
RP IDENTIFICATION.
RC STRAIN=Hereford {ECO:0000313|Ensembl:ENSBTAP00000013683.6};
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR AlphaFoldDB; F1MKH0; -.
DR SMR; F1MKH0; -.
DR STRING; 9913.ENSBTAP00000013683; -.
DR Ensembl; ENSBTAT00000013683.6; ENSBTAP00000013683.6; ENSBTAG00000010363.6.
DR VEuPathDB; HostDB:ENSBTAG00000010363; -.
DR VGNC; VGNC:54446; LSM11.
DR eggNOG; ENOG502QS1B; Eukaryota.
DR GeneTree; ENSGT00390000012944; -.
DR HOGENOM; CLU_065821_0_0_1; -.
DR InParanoid; F1MKH0; -.
DR OMA; QETSECA; -.
DR OrthoDB; 51292at2759; -.
DR TreeFam; TF326954; -.
DR Reactome; R-BTA-111367; SLBP independent Processing of Histone Pre-mRNAs.
DR Reactome; R-BTA-73856; RNA Polymerase II Transcription Termination.
DR Reactome; R-BTA-77588; SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs.
DR Proteomes; UP000009136; Chromosome 7.
DR Bgee; ENSBTAG00000010363; Expressed in oocyte and 94 other cell types or tissues.
DR GO; GO:0071204; C:histone pre-mRNA 3'end processing complex; IEA:Ensembl.
DR GO; GO:0016604; C:nuclear body; IEA:Ensembl.
DR GO; GO:0005697; C:telomerase holoenzyme complex; IEA:Ensembl.
DR GO; GO:0005683; C:U7 snRNP; IBA:GO_Central.
DR GO; GO:0071209; F:U7 snRNA binding; IBA:GO_Central.
DR GO; GO:0006398; P:mRNA 3'-end processing by stem-loop binding and cleavage; IBA:GO_Central.
DR GO; GO:1900087; P:positive regulation of G1/S transition of mitotic cell cycle; IEA:Ensembl.
DR GO; GO:1902275; P:regulation of chromatin organization; IEA:Ensembl.
DR CDD; cd01739; LSm11_M; 1.
DR Gene3D; 2.30.30.100; -; 1.
DR InterPro; IPR039267; Lsm11.
DR InterPro; IPR034109; Lsm11_M.
DR InterPro; IPR010920; LSM_dom_sf.
DR InterPro; IPR047575; Sm.
DR InterPro; IPR001163; Sm_dom_euk/arc.
DR PANTHER; PTHR21415; U7 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM11; 1.
DR PANTHER; PTHR21415:SF1; U7 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM11; 1.
DR SMART; SM00651; Sm; 1.
DR SUPFAM; SSF50182; Sm-like ribonucleoproteins; 2.
DR PROSITE; PS52002; SM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000009136}.
FT DOMAIN 153..228
FT /note="Sm"
FT /evidence="ECO:0000259|PROSITE:PS52002"
FT REGION 1..29
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 70..143
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 267..333
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 98..133
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 299..319
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 359 AA; 39735 MW; B15AA2909616DEA0 CRC64;
MEERERGARS ARAGSPARPP SPRLDVSSDS FDPLLALYAP HLPPIPYPNA PCFNNVAEYE
SFLRTGLRSG GRGRARGAAA GSGGPAAAAG PSGRTRRRPD APAPDPERIQ RLRRLMVAKE
EGDEAADARR RGPGRSRKAP RNVLTRMPLH EGSPLGELHR CIREGVKVNV HIRTFKGLRG
VCTGFLVAFD KFWNMALTDV DETYRKPVLG KAYERDSSLT LTRLFDRLKL QDSSKKETDS
KSAVEDSTLS RYSQTSTWKV ASVWGRGDTD RSSRRRSRSV PSSLQASARE ESRSELSGRT
TRTEGSSAGG TFSRATTLSR GPSRKKKRKP KVDYQQVFTR HINQIFIRGE NVLLVHLAQ
//
