ID F1S8H0_PIG Unreviewed; 102 AA.
AC F1S8H0;
DT 03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 14-DEC-2022, sequence version 4.
DT 27-MAR-2024, entry version 76.
DE SubName: Full=LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated {ECO:0000313|Ensembl:ENSSSCP00000014311.4};
GN Name=LSM7 {ECO:0000313|Ensembl:ENSSSCP00000014311.4,
GN ECO:0000313|VGNC:VGNC:89876};
OS Sus scrofa (Pig).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus.
OX NCBI_TaxID=9823 {ECO:0000313|Ensembl:ENSSSCP00000014311.4, ECO:0000313|Proteomes:UP000008227};
RN [1] {ECO:0000313|Ensembl:ENSSSCP00000014311.4, ECO:0000313|Proteomes:UP000008227}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Duroc {ECO:0000313|Ensembl:ENSSSCP00000014311.4,
RC ECO:0000313|Proteomes:UP000008227};
RG Porcine genome sequencing project;
RL Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSSSCP00000014311.4}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the snRNP Sm proteins family.
CC {ECO:0000256|ARBA:ARBA00006850}.
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DR AlphaFoldDB; F1S8H0; -.
DR PaxDb; 9823-ENSSSCP00000014311; -.
DR PeptideAtlas; F1S8H0; -.
DR Ensembl; ENSSSCT00000014708.5; ENSSSCP00000014311.4; ENSSSCG00000013463.5.
DR VGNC; VGNC:89876; LSM7.
DR eggNOG; KOG1781; Eukaryota.
DR GeneTree; ENSGT00510000047872; -.
DR HOGENOM; CLU_076902_3_1_1; -.
DR TreeFam; TF314385; -.
DR Proteomes; UP000008227; Chromosome 2.
DR Bgee; ENSSSCG00000013463; Expressed in longissimus lumborum muscle and 45 other cell types or tissues.
DR ExpressionAtlas; F1S8H0; baseline and differential.
DR Genevisible; F1S8H0; SS.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR GO; GO:0000956; P:nuclear-transcribed mRNA catabolic process; IEA:InterPro.
DR CDD; cd01729; LSm7; 1.
DR Gene3D; 2.30.30.100; -; 1.
DR InterPro; IPR017132; Lsm7.
DR InterPro; IPR044641; Lsm7/SmG-like.
DR InterPro; IPR010920; LSM_dom_sf.
DR InterPro; IPR047575; Sm.
DR InterPro; IPR001163; Sm_dom_euk/arc.
DR PANTHER; PTHR10553; SMALL NUCLEAR RIBONUCLEOPROTEIN; 1.
DR PANTHER; PTHR10553:SF5; U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM7; 1.
DR Pfam; PF01423; LSM; 1.
DR PIRSF; PIRSF037188; U6_snRNA_Lsm7; 1.
DR SMART; SM00651; Sm; 1.
DR SUPFAM; SSF50182; Sm-like ribonucleoproteins; 1.
DR PROSITE; PS52002; SM; 1.
PE 1: Evidence at protein level;
KW Proteomics identification {ECO:0007829|PeptideAtlas:F1S8H0};
KW Reference proteome {ECO:0000313|Proteomes:UP000008227}.
FT DOMAIN 9..89
FT /note="Sm"
FT /evidence="ECO:0000259|PROSITE:PS52002"
SQ SEQUENCE 102 AA; 11531 MW; 89557CA9F075AB55 CRC64;
MFPKKKKKES ILDLSKYIDK TIRVKFQGGR EASGILKGFD PLLNLVLDGT IEYMRDPDDQ
YKLTEDTRQL GLVVCRGTSV VLICPQDGME AIPNPFIQQQ DA
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