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Database: UniProt
Entry: F1SLI4_PIG
LinkDB: F1SLI4_PIG
Original site: F1SLI4_PIG 
ID   F1SLI4_PIG              Unreviewed;      1173 AA.
AC   F1SLI4;
DT   03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT   11-DEC-2019, sequence version 4.
DT   24-JAN-2024, entry version 87.
DE   RecName: Full=ATP-dependent RNA helicase DHX30 {ECO:0000256|ARBA:ARBA00039388};
DE            EC=3.6.4.13 {ECO:0000256|ARBA:ARBA00012552};
DE   AltName: Full=DEAH box protein 30 {ECO:0000256|ARBA:ARBA00042917};
GN   Name=DHX30 {ECO:0000313|Ensembl:ENSSSCP00000012095.4,
GN   ECO:0000313|VGNC:VGNC:87289};
OS   Sus scrofa (Pig).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus.
OX   NCBI_TaxID=9823 {ECO:0000313|Ensembl:ENSSSCP00000012095.4, ECO:0000313|Proteomes:UP000008227};
RN   [1] {ECO:0000313|Ensembl:ENSSSCP00000012095.4, ECO:0000313|Proteomes:UP000008227}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Duroc {ECO:0000313|Ensembl:ENSSSCP00000012095.4,
RC   ECO:0000313|Proteomes:UP000008227};
RG   Porcine genome sequencing project;
RL   Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSSSCP00000012095.4}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (JUL-2023) to UniProtKB.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC         ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC         ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC         Evidence={ECO:0000256|ARBA:ARBA00001556};
CC   -!- SUBCELLULAR LOCATION: Mitochondrion matrix, mitochondrion nucleoid
CC       {ECO:0000256|ARBA:ARBA00004436}.
CC   -!- SIMILARITY: Belongs to the DEAD box helicase family. DEAH subfamily.
CC       {ECO:0000256|ARBA:ARBA00008792}.
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DR   RefSeq; XP_013837077.1; XM_013981623.1.
DR   AlphaFoldDB; F1SLI4; -.
DR   PeptideAtlas; F1SLI4; -.
DR   Ensembl; ENSSSCT00000012419.5; ENSSSCP00000012095.4; ENSSSCG00000011342.5.
DR   GeneID; 100518989; -.
DR   CTD; 22907; -.
DR   VGNC; VGNC:87289; DHX30.
DR   GeneTree; ENSGT00940000158279; -.
DR   HOGENOM; CLU_001832_1_2_1; -.
DR   OrthoDB; 1095660at2759; -.
DR   TreeFam; TF352030; -.
DR   Proteomes; UP000008227; Chromosome 13.
DR   Bgee; ENSSSCG00000011342; Expressed in testis and 43 other cell types or tissues.
DR   ExpressionAtlas; F1SLI4; baseline.
DR   GO; GO:0005829; C:cytosol; IEA:Ensembl.
DR   GO; GO:0042645; C:mitochondrial nucleoid; IEA:Ensembl.
DR   GO; GO:0035770; C:ribonucleoprotein granule; IEA:Ensembl.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0003682; F:chromatin binding; IEA:Ensembl.
DR   GO; GO:0003725; F:double-stranded RNA binding; IEA:Ensembl.
DR   GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR   GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR   GO; GO:0007417; P:central nervous system development; IEA:Ensembl.
DR   GO; GO:1902775; P:mitochondrial large ribosomal subunit assembly; IEA:Ensembl.
DR   CDD; cd17976; DEXHc_DHX30; 1.
DR   CDD; cd18791; SF2_C_RHA; 1.
DR   Gene3D; 1.20.120.1080; -; 1.
DR   Gene3D; 3.30.160.20; -; 2.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR   InterPro; IPR011709; DEAD-box_helicase_OB_fold.
DR   InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR   InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS.
DR   InterPro; IPR007502; Helicase-assoc_dom.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR   PANTHER; PTHR18934:SF257; ATP-DEPENDENT RNA HELICASE DHX30; 1.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF21010; HA2_C; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF07717; OB_NTP_bind; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00847; HA2; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   PROSITE; PS00690; DEAH_ATP_HELICASE; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
PE   1: Evidence at protein level;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   Mitochondrion {ECO:0000256|ARBA:ARBA00023271};
KW   Mitochondrion nucleoid {ECO:0000256|ARBA:ARBA00023271};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Phosphoprotein {ECO:0000256|ARBA:ARBA00022553};
KW   Proteomics identification {ECO:0007829|PeptideAtlas:F1SLI4};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008227};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT   DOMAIN          423..591
FT                   /note="Helicase ATP-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS51192"
FT   DOMAIN          633..806
FT                   /note="Helicase C-terminal"
FT                   /evidence="ECO:0000259|PROSITE:PS51194"
FT   REGION          1..21
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          129..179
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1173 AA;  131222 MW;  411FB936377E8B8A CRC64;
     MDPKRRGSGT GAPAPAPAGI ASRDLLKEFP QPKNLLNSVI GRALGISHAK DKLVYVHTNG
     PKKKKVTLHI KWPKSVEVEG YGSKKIDAER QAAAAACQLF KGWGLLGPRN ELFDAAKYRV
     LADRFGSPAD SWWRPEPTMP PTSWRQLNPE SIRPGGPAGL SRTLGREEEE DEEEELEEGT
     IDVTEFLSMT QQDSHTPLRD SRGGSFEMTD DDSAIRALTQ FPLPKNLLAK VIQIATSSST
     AKNLMQFHTV GTKTKLSTLT LLWPCPMTFV AKGRRKAEAE NKAAALACKK LKSLGLVDRN
     NEPLTHAMYN LASLRELGET QRRPCTIQVP EPILRKIETF LNHYPVDNSW ISPELRLQGD
     DILPLGKDSG PLSDPITGKP YVPLSEAEEL RLSQNLLELW RRRGPVWQEA PQLPVDPHRD
     TILNAIEQHP VVVIAGDTGC GKTTRIPQLL LERYVTEGRG ARCNVIITQP RRISAVSVAQ
     RVSHELGPSL RRNVGFQVRL ESKPPARGGA LLFCTVGILL RKLQSNPSLE GVSHVIVDEV
     HERDVNTDFL LILLKGLQRL NPALRLVLMS ATGDNERFSR YFGGCPVIKV PGFMYPVKEH
     YLEDILAKLG KHQYPHRHRH HESEDECALD LDLVTDLVLH IDARGEPGGI LCFLPGWQEI
     KGVQQRLQEA LGMHESKYLI LPVHSNIPMM DQKAIFQQPP VGVRKIVLAT NIAETSITIN
     DIVHVVDSGL HKEERYDLKT KVSCLETVWV SRANVIQRRG RAGRCQSGFA YHLFPRSRLE
     KMVPFQVPEI LRTPLENLVL QAKIHMPEKT AVEFLSKAVD SPNIKAVDEA VILLQEIGVL
     DQREYLTTLG QRLAHISTDP RLAKAIVLAA IFRCLHPLLV VVSCLTRDPF SSSLQNRAEV
     DKVKALLSHD SGSDHLAFVR AVSGWEEVLR WQDRSSRENY LEENLLYAPS LRFIHGLIKQ
     FSENIYEAFL VGKPSDCTLA SAQCNEYSEE EELVKGVLMA GLYPNLIQVR QGKVTRQGKF
     KPNSVTYRTK SGNILLHKST INREATRLRS RWLTYFMAVK SNGSVFVRDS SQVHPLAVLL
     LTDGDVHIRD DGRRATISLS DSDLLRLEGD SRTVRLLREL RRALGRMVER SLRSELATLP
     PCVQQEHGQL LALLAELLRG PCGSFDVRKT ADD
//
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