GenomeNet

Database: UniProt
Entry: F1Z9G2_9SPHN
LinkDB: F1Z9G2_9SPHN
Original site: F1Z9G2_9SPHN 
ID   F1Z9G2_9SPHN            Unreviewed;       190 AA.
AC   F1Z9G2;
DT   31-MAY-2011, integrated into UniProtKB/TrEMBL.
DT   31-MAY-2011, sequence version 1.
DT   24-JAN-2024, entry version 42.
DE   SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:EGD58780.1};
GN   ORFNames=Y88_0838 {ECO:0000313|EMBL:EGD58780.1};
OS   Novosphingobium nitrogenifigens DSM 19370.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Novosphingobium.
OX   NCBI_TaxID=983920 {ECO:0000313|EMBL:EGD58780.1, ECO:0000313|Proteomes:UP000004728};
RN   [1] {ECO:0000313|EMBL:EGD58780.1, ECO:0000313|Proteomes:UP000004728}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 19370 {ECO:0000313|EMBL:EGD58780.1,
RC   ECO:0000313|Proteomes:UP000004728};
RX   PubMed=22156397; DOI=10.1128/JB.06381-11;
RA   Strabala T.J., Macdonald L., Liu V., Smit A.M.;
RT   "Draft Genome Sequence of Novosphingobium nitrogenifigens Y88T.";
RL   J. Bacteriol. 194:201-201(2012).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EGD58780.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AEWJ01000041; EGD58780.1; -; Genomic_DNA.
DR   RefSeq; WP_008066224.1; NZ_GL876926.1.
DR   AlphaFoldDB; F1Z9G2; -.
DR   STRING; 983920.Y88_0838; -.
DR   eggNOG; COG1476; Bacteria.
DR   HOGENOM; CLU_1446791_0_0_5; -.
DR   InParanoid; F1Z9G2; -.
DR   OrthoDB; 7404022at2; -.
DR   Proteomes; UP000004728; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   CDD; cd00093; HTH_XRE; 1.
DR   Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR   InterPro; IPR001387; Cro/C1-type_HTH.
DR   InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR   Pfam; PF13560; HTH_31; 1.
DR   SMART; SM00530; HTH_XRE; 1.
DR   SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR   PROSITE; PS50943; HTH_CROC1; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000004728}.
FT   DOMAIN          5..61
FT                   /note="HTH cro/C1-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50943"
SQ   SEQUENCE   190 AA;  20876 MW;  00DC60B3296FB547 CRC64;
     MINRIRDIRR QKGLTLAEVA ARCQPPTTAQ TIGRLETGMR SLSLAWMNRI AVALEVDPQM
     LVKADSDQAP ALIAKLGING AEAVARPVEA IFPIVPNGDS HVVVMMVEAC AGEYRTGDQI
     WLRQIGHDDF PRALNRDVLA PRPGGRFAFG RMIDRDGERI AILPPGIGQR QVVIDRPGWL
     GVAEMLVRKL
//
DBGET integrated database retrieval system