ID F1ZCN4_9SPHN Unreviewed; 315 AA.
AC F1ZCN4;
DT 31-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 31-MAY-2011, sequence version 1.
DT 27-MAR-2024, entry version 51.
DE SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:EGD57629.1};
GN ORFNames=Y88_2953 {ECO:0000313|EMBL:EGD57629.1};
OS Novosphingobium nitrogenifigens DSM 19370.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Novosphingobium.
OX NCBI_TaxID=983920 {ECO:0000313|EMBL:EGD57629.1, ECO:0000313|Proteomes:UP000004728};
RN [1] {ECO:0000313|EMBL:EGD57629.1, ECO:0000313|Proteomes:UP000004728}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 19370 {ECO:0000313|EMBL:EGD57629.1,
RC ECO:0000313|Proteomes:UP000004728};
RX PubMed=22156397; DOI=10.1128/JB.06381-11;
RA Strabala T.J., Macdonald L., Liu V., Smit A.M.;
RT "Draft Genome Sequence of Novosphingobium nitrogenifigens Y88T.";
RL J. Bacteriol. 194:201-201(2012).
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EGD57629.1}.
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DR EMBL; AEWJ01000055; EGD57629.1; -; Genomic_DNA.
DR RefSeq; WP_008071137.1; NZ_GL876934.1.
DR AlphaFoldDB; F1ZCN4; -.
DR STRING; 983920.Y88_2953; -.
DR eggNOG; COG0583; Bacteria.
DR HOGENOM; CLU_039613_16_2_5; -.
DR InParanoid; F1ZCN4; -.
DR OrthoDB; 9812435at2; -.
DR Proteomes; UP000004728; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd08422; PBP2_CrgA_like; 1.
DR Gene3D; 3.40.190.290; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30537:SF5; HTH-TYPE TRANSCRIPTIONAL ACTIVATOR TTDR-RELATED; 1.
DR PANTHER; PTHR30537; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR PRINTS; PR00039; HTHLYSR.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000004728}.
FT DOMAIN 4..61
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 315 AA; 34017 MW; F91B0CD5903DDE90 CRC64;
MPLPDLEAWA IFAKVVETGS FAAAAEALGL SKPTVSKAMG RLEARLGIPL LHRTSRRLAL
TESGRGVLDK ARRILADGEA AEAEARADGD IPRGLVRLAV PMSFGLRHVA PLLPEFLAAW
PLVSVDLDLS DTLVNVVAGG HDIVLRIAGL EDSSLRARRL CTVRRPLVAA PAYLAVHGTP
THPRELSAHQ GLLYTNLEHP GLWRFTHPSE GEYGVTVHGR LGANNADALA PALLAGQGIA
LQPDFMVWDH LAKGTLVEVM SDWRIPDIAL HLVTPPGKQR PARVRVLLDF LAARLRDAPW
ADRGKSLSPE EKHAQ
//
