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Database: UniProt
Entry: F2SHN3_TRIRC
LinkDB: F2SHN3_TRIRC
Original site: F2SHN3_TRIRC 
ID   F2SHN3_TRIRC            Unreviewed;        84 AA.
AC   F2SHN3;
DT   31-MAY-2011, integrated into UniProtKB/TrEMBL.
DT   31-MAY-2011, sequence version 1.
DT   24-JAN-2024, entry version 46.
DE   RecName: Full=U6 snRNA-associated Sm-like protein LSm5 {ECO:0000256|RuleBase:RU365055};
GN   Name=LSM5 {ECO:0000256|RuleBase:RU365055};
GN   ORFNames=TERG_01710 {ECO:0000313|EMBL:EGD85438.1};
OS   Trichophyton rubrum (strain ATCC MYA-4607 / CBS 118892) (Athlete's foot
OS   fungus).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC   Eurotiomycetidae; Onygenales; Arthrodermataceae; Trichophyton.
OX   NCBI_TaxID=559305 {ECO:0000313|EMBL:EGD85438.1, ECO:0000313|Proteomes:UP000008864};
RN   [1] {ECO:0000313|Proteomes:UP000008864}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC MYA-4607 / CBS 118892 {ECO:0000313|Proteomes:UP000008864};
RX   PubMed=22951933; DOI=10.1128/mbio.00259-12;
RA   Martinez D.A., Oliver B.G., Graeser Y., Goldberg J.M., Li W.,
RA   Martinez-Rossi N.M., Monod M., Shelest E., Barton R.C., Birch E.,
RA   Brakhage A.A., Chen Z., Gurr S.J., Heiman D., Heitman J., Kosti I.,
RA   Rossi A., Saif S., Samalova M., Saunders C.W., Shea T., Summerbell R.C.,
RA   Xu J., Young S., Zeng Q., Birren B.W., Cuomo C.A., White T.C.;
RT   "Comparative genome analysis of Trichophyton rubrum and related
RT   dermatophytes reveals candidate genes involved in infection.";
RL   MBio 3:E259-E259(2012).
CC   -!- FUNCTION: Plays a role in U6 snRNP assembly and function. Binds to the
CC       3' end of U6 snRNA. {ECO:0000256|RuleBase:RU365055}.
CC   -!- SUBUNIT: Component of the heptameric LSM1-LSM7 complex, which consists
CC       of LSM1, LSM2, LSM3, LSM4, LSM5, LSM6 and LSM7. Component of the
CC       heptameric LSM2-LSM8 complex, which consists of LSM2, LSM3, LSM4, LSM5,
CC       LSM6, LSM7 and LSM8. The LSm subunits form a seven-membered ring
CC       structure with a doughnut shape. {ECO:0000256|ARBA:ARBA00025892}.
CC   -!- SUBUNIT: LSm subunits form a heteromer with a doughnut shape.
CC       {ECO:0000256|RuleBase:RU365055}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC       ECO:0000256|RuleBase:RU365055}.
CC   -!- SIMILARITY: Belongs to the snRNP Sm proteins family.
CC       {ECO:0000256|ARBA:ARBA00006850, ECO:0000256|RuleBase:RU365055}.
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DR   EMBL; GG700649; EGD85438.1; -; Genomic_DNA.
DR   RefSeq; XP_003236987.1; XM_003236939.1.
DR   AlphaFoldDB; F2SHN3; -.
DR   STRING; 559305.F2SHN3; -.
DR   GeneID; 10373443; -.
DR   VEuPathDB; FungiDB:TERG_01710; -.
DR   eggNOG; KOG1775; Eukaryota.
DR   HOGENOM; CLU_076902_6_1_1; -.
DR   InParanoid; F2SHN3; -.
DR   OMA; YETTPQG; -.
DR   OrthoDB; 275126at2759; -.
DR   Proteomes; UP000008864; Unassembled WGS sequence.
DR   GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR   GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR   GO; GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
DR   CDD; cd01732; LSm5; 1.
DR   Gene3D; 2.30.30.100; -; 1.
DR   InterPro; IPR033871; LSm5.
DR   InterPro; IPR010920; LSM_dom_sf.
DR   InterPro; IPR047575; Sm.
DR   InterPro; IPR001163; Sm_dom_euk/arc.
DR   PANTHER; PTHR20971; U6 SNRNA-ASSOCIATED PROTEIN; 1.
DR   PANTHER; PTHR20971:SF0; U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM5; 1.
DR   Pfam; PF01423; LSM; 1.
DR   SMART; SM00651; Sm; 1.
DR   SUPFAM; SSF50182; Sm-like ribonucleoproteins; 1.
DR   PROSITE; PS52002; SM; 1.
PE   3: Inferred from homology;
KW   mRNA processing {ECO:0000256|ARBA:ARBA00022664,
KW   ECO:0000256|RuleBase:RU365055};
KW   mRNA splicing {ECO:0000256|RuleBase:RU365055};
KW   Nucleus {ECO:0000256|RuleBase:RU365055};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008864};
KW   Ribonucleoprotein {ECO:0000256|RuleBase:RU365055};
KW   RNA-binding {ECO:0000256|RuleBase:RU365055};
KW   Spliceosome {ECO:0000256|RuleBase:RU365055}.
FT   DOMAIN          6..78
FT                   /note="Sm"
FT                   /evidence="ECO:0000259|PROSITE:PS52002"
SQ   SEQUENCE   84 AA;  9040 MW;  E8C44E5A07B62520 CRC64;
     MASQLLPLEL IDKCVGSKIW IVMKGDKEFC GTLLGFDDYV NMVLEDVTEF DYSGGQTKLS
     KILLNGNNVC MLIPGGEGPV SAAP
//
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