ID F2T101_TRIRC Unreviewed; 247 AA.
AC F2T101;
DT 31-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 31-MAY-2011, sequence version 1.
DT 24-JAN-2024, entry version 48.
DE RecName: Full=Exosome complex subunit Csl4 {ECO:0008006|Google:ProtNLM};
GN ORFNames=TERG_08490 {ECO:0000313|EMBL:EGD92273.1};
OS Trichophyton rubrum (strain ATCC MYA-4607 / CBS 118892) (Athlete's foot
OS fungus).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Onygenales; Arthrodermataceae; Trichophyton.
OX NCBI_TaxID=559305 {ECO:0000313|EMBL:EGD92273.1, ECO:0000313|Proteomes:UP000008864};
RN [1] {ECO:0000313|Proteomes:UP000008864}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC MYA-4607 / CBS 118892 {ECO:0000313|Proteomes:UP000008864};
RX PubMed=22951933; DOI=10.1128/mbio.00259-12;
RA Martinez D.A., Oliver B.G., Graeser Y., Goldberg J.M., Li W.,
RA Martinez-Rossi N.M., Monod M., Shelest E., Barton R.C., Birch E.,
RA Brakhage A.A., Chen Z., Gurr S.J., Heiman D., Heitman J., Kosti I.,
RA Rossi A., Saif S., Samalova M., Saunders C.W., Shea T., Summerbell R.C.,
RA Xu J., Young S., Zeng Q., Birren B.W., Cuomo C.A., White T.C.;
RT "Comparative genome analysis of Trichophyton rubrum and related
RT dermatophytes reveals candidate genes involved in infection.";
RL MBio 3:E259-E259(2012).
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000256|ARBA:ARBA00004604}.
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DR EMBL; GG700662; EGD92273.1; -; Genomic_DNA.
DR RefSeq; XP_003231014.1; XM_003230966.1.
DR AlphaFoldDB; F2T101; -.
DR STRING; 559305.F2T101; -.
DR GeneID; 10377140; -.
DR VEuPathDB; FungiDB:TERG_08490; -.
DR eggNOG; KOG3409; Eukaryota.
DR HOGENOM; CLU_067135_2_0_1; -.
DR InParanoid; F2T101; -.
DR OMA; PMVPVGW; -.
DR OrthoDB; 166721at2759; -.
DR Proteomes; UP000008864; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR Gene3D; 2.40.50.100; -; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR InterPro; IPR039771; Csl4.
DR InterPro; IPR019495; EXOSC1_C.
DR InterPro; IPR025721; Exosome_cplx_N_dom.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR PANTHER; PTHR12686; 3'-5' EXORIBONUCLEASE CSL4-RELATED; 1.
DR PANTHER; PTHR12686:SF8; EXOSOME COMPLEX COMPONENT CSL4; 1.
DR Pfam; PF14382; ECR1_N; 1.
DR Pfam; PF10447; EXOSC1; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF110324; Ribosomal L27 protein-like; 1.
PE 4: Predicted;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Exosome {ECO:0000256|ARBA:ARBA00022835};
KW Reference proteome {ECO:0000313|Proteomes:UP000008864}.
FT DOMAIN 8..43
FT /note="Exosome complex component N-terminal"
FT /evidence="ECO:0000259|Pfam:PF14382"
FT DOMAIN 90..194
FT /note="Exosome complex component CSL4 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF10447"
FT REGION 42..86
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 62..86
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 247 AA; 27001 MW; 9C98FD8A92D72E39 CRC64;
MATRIPSIAV PGLRLGDSST FSSGPGTYVR DSSICASIPG PVILKTDDKG TDPKRKPRKI
LTVSRSPQTD TPNSTQNQQQ TKSPLKFNTL PAVDSIVLAR VTRVQKRQAT VSILMVVDDQ
NNDLIDTNMR TILSSAPIIT TAGTDSTSTS NTADDLRFQA IIRKEDVRAV EKDRVVMEDM
FRVGDIVRAY VISVGDQSSY YCSTARNELG VVMARSEGGN MMFPVSWKEM RDPITGIGEA
RKVAKPF
//