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Database: UniProt
Entry: F2T101_TRIRC
LinkDB: F2T101_TRIRC
Original site: F2T101_TRIRC 
ID   F2T101_TRIRC            Unreviewed;       247 AA.
AC   F2T101;
DT   31-MAY-2011, integrated into UniProtKB/TrEMBL.
DT   31-MAY-2011, sequence version 1.
DT   24-JAN-2024, entry version 48.
DE   RecName: Full=Exosome complex subunit Csl4 {ECO:0008006|Google:ProtNLM};
GN   ORFNames=TERG_08490 {ECO:0000313|EMBL:EGD92273.1};
OS   Trichophyton rubrum (strain ATCC MYA-4607 / CBS 118892) (Athlete's foot
OS   fungus).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC   Eurotiomycetidae; Onygenales; Arthrodermataceae; Trichophyton.
OX   NCBI_TaxID=559305 {ECO:0000313|EMBL:EGD92273.1, ECO:0000313|Proteomes:UP000008864};
RN   [1] {ECO:0000313|Proteomes:UP000008864}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC MYA-4607 / CBS 118892 {ECO:0000313|Proteomes:UP000008864};
RX   PubMed=22951933; DOI=10.1128/mbio.00259-12;
RA   Martinez D.A., Oliver B.G., Graeser Y., Goldberg J.M., Li W.,
RA   Martinez-Rossi N.M., Monod M., Shelest E., Barton R.C., Birch E.,
RA   Brakhage A.A., Chen Z., Gurr S.J., Heiman D., Heitman J., Kosti I.,
RA   Rossi A., Saif S., Samalova M., Saunders C.W., Shea T., Summerbell R.C.,
RA   Xu J., Young S., Zeng Q., Birren B.W., Cuomo C.A., White T.C.;
RT   "Comparative genome analysis of Trichophyton rubrum and related
RT   dermatophytes reveals candidate genes involved in infection.";
RL   MBio 3:E259-E259(2012).
CC   -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC       {ECO:0000256|ARBA:ARBA00004604}.
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DR   EMBL; GG700662; EGD92273.1; -; Genomic_DNA.
DR   RefSeq; XP_003231014.1; XM_003230966.1.
DR   AlphaFoldDB; F2T101; -.
DR   STRING; 559305.F2T101; -.
DR   GeneID; 10377140; -.
DR   VEuPathDB; FungiDB:TERG_08490; -.
DR   eggNOG; KOG3409; Eukaryota.
DR   HOGENOM; CLU_067135_2_0_1; -.
DR   InParanoid; F2T101; -.
DR   OMA; PMVPVGW; -.
DR   OrthoDB; 166721at2759; -.
DR   Proteomes; UP000008864; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR   Gene3D; 2.40.50.100; -; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   InterPro; IPR039771; Csl4.
DR   InterPro; IPR019495; EXOSC1_C.
DR   InterPro; IPR025721; Exosome_cplx_N_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   PANTHER; PTHR12686; 3'-5' EXORIBONUCLEASE CSL4-RELATED; 1.
DR   PANTHER; PTHR12686:SF8; EXOSOME COMPLEX COMPONENT CSL4; 1.
DR   Pfam; PF14382; ECR1_N; 1.
DR   Pfam; PF10447; EXOSC1; 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR   SUPFAM; SSF110324; Ribosomal L27 protein-like; 1.
PE   4: Predicted;
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW   Exosome {ECO:0000256|ARBA:ARBA00022835};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008864}.
FT   DOMAIN          8..43
FT                   /note="Exosome complex component N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF14382"
FT   DOMAIN          90..194
FT                   /note="Exosome complex component CSL4 C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF10447"
FT   REGION          42..86
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        62..86
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   247 AA;  27001 MW;  9C98FD8A92D72E39 CRC64;
     MATRIPSIAV PGLRLGDSST FSSGPGTYVR DSSICASIPG PVILKTDDKG TDPKRKPRKI
     LTVSRSPQTD TPNSTQNQQQ TKSPLKFNTL PAVDSIVLAR VTRVQKRQAT VSILMVVDDQ
     NNDLIDTNMR TILSSAPIIT TAGTDSTSTS NTADDLRFQA IIRKEDVRAV EKDRVVMEDM
     FRVGDIVRAY VISVGDQSSY YCSTARNELG VVMARSEGGN MMFPVSWKEM RDPITGIGEA
     RKVAKPF
//
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