ID F2U9T1_SALR5 Unreviewed; 865 AA.
AC F2U9T1;
DT 31-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 31-MAY-2011, sequence version 1.
DT 27-MAR-2024, entry version 57.
DE SubName: Full=Nucleotide excision repair protein {ECO:0000313|EMBL:EGD73108.1};
GN ORFNames=PTSG_04822 {ECO:0000313|EMBL:EGD73108.1};
OS Salpingoeca rosetta (strain ATCC 50818 / BSB-021).
OC Eukaryota; Choanoflagellata; Craspedida; Salpingoecidae; Salpingoeca.
OX NCBI_TaxID=946362 {ECO:0000313|Proteomes:UP000007799};
RN [1] {ECO:0000313|Proteomes:UP000007799}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 50818 {ECO:0000313|Proteomes:UP000007799};
RA Russ C., Cuomo C., Burger G., Gray M.W., Holland P.W.H., King N.,
RA Lang F.B.F., Roger A.J., Ruiz-Trillo I., Young S.K., Zeng Q., Gargeya S.,
RA Alvarado L., Berlin A., Chapman S.B., Chen Z., Freedman E., Gellesch M.,
RA Goldberg J., Griggs A., Gujja S., Heilman E., Heiman D., Howarth C.,
RA Mehta T., Neiman D., Pearson M., Roberts A., Saif S., Shea T., Shenoy N.,
RA Sisk P., Stolte C., Sykes S., White J., Yandava C., Haas B., Nusbaum C.,
RA Birren B.;
RT "Annotation of Salpingoeca rosetta.";
RL Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; GL832965; EGD73108.1; -; Genomic_DNA.
DR RefSeq; XP_004994139.1; XM_004994082.1.
DR AlphaFoldDB; F2U9T1; -.
DR STRING; 946362.F2U9T1; -.
DR EnsemblProtists; EGD73108; EGD73108; PTSG_04822.
DR GeneID; 16074717; -.
DR KEGG; sre:PTSG_04822; -.
DR eggNOG; KOG1002; Eukaryota.
DR InParanoid; F2U9T1; -.
DR OMA; LANNKYS; -.
DR OrthoDB; 200191at2759; -.
DR Proteomes; UP000007799; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR CDD; cd18008; DEXDc_SHPRH-like; 1.
DR CDD; cd16567; RING-HC_RAD16-like; 1.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR049730; SNF2/RAD54-like_C.
DR InterPro; IPR000330; SNF2_N.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR45626:SF12; DNA REPAIR PROTEIN RAD16; 1.
DR PANTHER; PTHR45626; TRANSCRIPTION TERMINATION FACTOR 2-RELATED; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF00176; SNF2-rel_dom; 2.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000007799};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT DOMAIN 272..451
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 613..654
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 698..852
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 1..220
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 51..75
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 105..125
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 126..146
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 152..167
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 191..206
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 865 AA; 97911 MW; F9B4B2ACAE460B0A CRC64;
MAAGRRTGRR KAKAEPEKEK EEDDVLVIED DEDEEETGSV RRRSPRVQMN KTRKARQSQV
ATTPAPSSSS TVAPRRSPRR KPRSKETPAQ QLRKATARTS FVGSDDDDDD GDDDDEDDVW
EPDVDEEASS SSSNSPSNSD SDFDDLLSSP TVVKPTPPPP PPEPQPTKRA KRTAARRRNA
RGDGAAGRAS TPAASSGTSS ASASQQRRKV GRKKKETLDE RIHRLHPEIK EVWTTLRGID
PSTELDIPEQ PENLAVTLLP FQREGLAWMI NQESNSDFQG GILADEMGMG KTIQTIALLL
SRPSQAEPRK PTLVIAPTVA LFQWRTEVEA KSKPGSLKVL VYYGSGRNRD ADHITSFDVV
LTTYATVESE WRRQQSGFKR KGEKVKEKST IHSIAWHRVV LDEAHFIKDR SCSTARAVFG
LSAKYKWSLS GTPLQNRVGE MYSLVKFLKG DPFSFYFCRQ CECKSLTWNF SNYKRCDDCG
HANCSHFAWW NREILRPIQK FGPVGAGKVA FDHLRQLLSA IMLRRTKVDR GSELGLPPRI
IHTRRDLFTH EEEDFYEALF SESKTRFQSF VRAGTVLNNY AHIFELLMRM RQSVNHPWLV
THRVDSKDDK DVCGICHEFA EDPIMSGCKH TFCREEVELY ISSSCAEVPV CPVCFQPLSI
DLTQPTIERP KIAEKSKSKS IVRRLDMERW QSSTKIEALL EELTALQSDT HCIKSIIFSQ
FTQFLDLLEW RLQRGGIRCV KLDGRMSPAS RAAVIDAFNT KPEITVFLIS LKAGGLALNL
TAASRVYITD PWWNPCAEAQ AMDRIHRLGQ NRPVEVRRLI IENSIESRID QLQEKKRLLF
ESTVGMNSSA LNRLTEEDLR FLFVL
//
