ID F3FM85_PSESX Unreviewed; 313 AA.
AC F3FM85;
DT 28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2011, sequence version 1.
DT 27-MAR-2024, entry version 55.
DE SubName: Full=Ribonuclease R {ECO:0000313|EMBL:EGH31321.1};
DE Flags: Fragment;
GN ORFNames=PSYJA_21003 {ECO:0000313|EMBL:EGH31321.1};
OS Pseudomonas syringae pv. japonica str. M301072.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.
OX NCBI_TaxID=629262 {ECO:0000313|EMBL:EGH31321.1, ECO:0000313|Proteomes:UP000004471};
RN [1] {ECO:0000313|EMBL:EGH31321.1, ECO:0000313|Proteomes:UP000004471}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=M301072PT {ECO:0000313|Proteomes:UP000004471};
RX PubMed=21799664; DOI=10.1371/journal.ppat.1002132;
RA Baltrus D.A., Nishimura M.T., Romanchuk A., Chang J.H., Mukhtar M.S.,
RA Cherkis K., Roach J., Grant S.R., Jones C.D., Dangl J.L.;
RT "Dynamic evolution of pathogenicity revealed by sequencing and comparative
RT genomics of 19 Pseudomonas syringae isolates.";
RL PLoS Pathog. 7:E1002132-e1002132(2011).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EGH31321.1}.
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DR EMBL; AEAH01000955; EGH31321.1; -; Genomic_DNA.
DR AlphaFoldDB; F3FM85; -.
DR HOGENOM; CLU_002333_3_0_6; -.
DR Proteomes; UP000004471; Unassembled WGS sequence.
DR GO; GO:0005829; C:cytosol; IEA:UniProt.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0004540; F:RNA nuclease activity; IEA:InterPro.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR040476; CSD2.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR013223; RNase_B_OB_dom.
DR InterPro; IPR001900; RNase_II/R.
DR InterPro; IPR013668; RNase_R_HTH_12.
DR PANTHER; PTHR23355:SF9; DIS3-LIKE EXONUCLEASE 2; 1.
DR PANTHER; PTHR23355; RIBONUCLEASE; 1.
DR Pfam; PF17876; CSD2; 1.
DR Pfam; PF08461; HTH_12; 1.
DR Pfam; PF08206; OB_RNB; 1.
DR Pfam; PF00773; RNB; 1.
DR SMART; SM00357; CSP; 2.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 2.
PE 4: Predicted;
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722}.
FT DOMAIN 90..149
FT /note="Cold shock"
FT /evidence="ECO:0000259|SMART:SM00357"
FT DOMAIN 154..218
FT /note="Cold shock"
FT /evidence="ECO:0000259|SMART:SM00357"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 313
FT /evidence="ECO:0000313|EMBL:EGH31321.1"
SQ SEQUENCE 313 AA; 35278 MW; BC1E72CCEF59C207 CRC64;
MADWQSLDPE AAREAEKYEN PIPSRELILQ HLAERGSPAS REQLVEEFGL TTEDQFEALR
RRLGAMERDA QLIYTRRGTY APVDKLDLIL GRISGHRDGF GFLVPDDGSD DLFMSPAQMR
LVFDGDRALA RVSGLDRRGR REGVIVEVIS RAHESIVGRY FEESGIGFVV PDNPKIQQEV
LVTPGRNNGA KIGQFVEVKI THWPTPRFQP QGDVIEVVGN YMAPGMEIDV ALRTYDIPHV
WPEAVLKEAA KLKPEVEEKD KEHRVDLRHL PFVTIDGEDA RDFDDAVYCE AKPGKLRLFS
GGWKLYVAIA DVS
//
