ID F4D004_PSEUX Unreviewed; 701 AA.
AC F4D004;
DT 28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2011, sequence version 1.
DT 27-MAR-2024, entry version 67.
DE SubName: Full=Glycogen debranching enzyme GlgX {ECO:0000313|EMBL:AEA24837.1};
DE EC=3.2.1.68 {ECO:0000313|EMBL:AEA24837.1};
GN OrderedLocusNames=Psed_2634 {ECO:0000313|EMBL:AEA24837.1};
OS Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 /
OS CB1190).
OC Bacteria; Actinomycetota; Actinomycetes; Pseudonocardiales;
OC Pseudonocardiaceae; Pseudonocardia.
OX NCBI_TaxID=675635 {ECO:0000313|EMBL:AEA24837.1, ECO:0000313|Proteomes:UP000007809};
RN [1] {ECO:0000313|EMBL:AEA24837.1, ECO:0000313|Proteomes:UP000007809}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 55486 / DSM 44775 / JCM 13855 / CB1190
RC {ECO:0000313|Proteomes:UP000007809};
RX PubMed=21725009; DOI=10.1128/JB.00415-11;
RA Sales C.M., Mahendra S., Grostern A., Parales R.E., Goodwin L.A., Woyke T.,
RA Nolan M., Lapidus A., Chertkov O., Ovchinnikova G., Sczyrba A.,
RA Alvarez-Cohen L.;
RT "Genome sequence of the 1,4-dioxane-degrading Pseudonocardia dioxanivorans
RT strain CB1190.";
RL J. Bacteriol. 193:4549-4550(2011).
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 13 family.
CC {ECO:0000256|ARBA:ARBA00008061}.
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DR EMBL; CP002593; AEA24837.1; -; Genomic_DNA.
DR RefSeq; WP_013674761.1; NC_015312.1.
DR AlphaFoldDB; F4D004; -.
DR STRING; 675635.Psed_2634; -.
DR KEGG; pdx:Psed_2634; -.
DR eggNOG; COG1523; Bacteria.
DR HOGENOM; CLU_011725_1_1_11; -.
DR OrthoDB; 3236218at2; -.
DR Proteomes; UP000007809; Chromosome.
DR GO; GO:0004133; F:glycogen debranching enzyme activity; IEA:InterPro.
DR GO; GO:0019156; F:isoamylase activity; IEA:UniProtKB-EC.
DR GO; GO:0005980; P:glycogen catabolic process; IEA:InterPro.
DR CDD; cd11326; AmyAc_Glg_debranch; 1.
DR CDD; cd02856; E_set_GDE_Isoamylase_N; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR Gene3D; 2.60.40.1180; Golgi alpha-mannosidase II; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR044505; GlgX_Isoamylase_N_E_set.
DR InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR InterPro; IPR004193; Glyco_hydro_13_N.
DR InterPro; IPR013780; Glyco_hydro_b.
DR InterPro; IPR011837; Glycogen_debranch_GlgX.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR NCBIfam; TIGR02100; glgX_debranch; 1.
DR PANTHER; PTHR43002; GLYCOGEN DEBRANCHING ENZYME; 1.
DR PANTHER; PTHR43002:SF1; ISOAMYLASE 1, CHLOROPLASTIC; 1.
DR Pfam; PF00128; Alpha-amylase; 1.
DR Pfam; PF02922; CBM_48; 1.
DR SMART; SM00642; Aamy; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF81296; E set domains; 1.
DR SUPFAM; SSF51011; Glycosyl hydrolase domain; 1.
PE 3: Inferred from homology;
KW Glycosidase {ECO:0000313|EMBL:AEA24837.1};
KW Hydrolase {ECO:0000313|EMBL:AEA24837.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000007809}.
FT DOMAIN 158..568
FT /note="Glycosyl hydrolase family 13 catalytic"
FT /evidence="ECO:0000259|SMART:SM00642"
FT REGION 466..495
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 466..481
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 701 AA; 79118 MW; BDCA88E8B2989755 CRC64;
MQLWPGSPHP LGATWDGGGT NFALFSEPAD MIELCLFDED GVETRVPLPE RDGFVWHGYL
PRVRPGTRYG YRVHGPYDPA AGLRCNPAKL LLDPYAMAVD GEITWDEAMF AYRFGDPDSR
NDADSAPFAM RSVVADPYFD WQDDRPLRIP YHETVLYEAH VRGLTMTNPK VPRDVRGTYA
GIAHPATVEH LRGLGVTALE LMPVHQFVHD STLADRGLRN YWGYNTIGFF APHNGYAGFG
TRGEQVQEFK SMVRTLHRAG IEVILDVVYN HTAEGNHLGP TLSFRGIDNL AYYRVVPGDP
RHYYDTTGTG NSLNARHHES LRLIMDSLRY WVTEMHVDGF RFDLASSLAR EFHEVDRLAA
FFDLVNQDPV VSRVKLIAEP WDVGEGGYQV GGFPPLWTEW NGRYRDTVRD FWRGEPGMLP
ELASRFSGSS DLYEADGRRP HASINFVTAH DGFTLADLVS YHEKRNEANG EDNRDGESHN
RSWNCGAEGP TDDSDVNVLR ERQKRNLLTT LLLSQGVPMI SHGDELGRTQ GGNNNAYCQD
SPLSWIDWEA AREHEVLTEF VAGLARLRAE HPVFRRRRFF QGRPIHGSDV ADVAWLRPDA
TPMSDADWHS RSSLAIFLNG HGIPDRDDVG RTIVDDSFLL LVNAAPQHTT FTLPDETYGR
TWRIVVDTAD PLLATARRRR PAPGARLRLQ PWSTTVLLSR Y
//
