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Database: UniProt
Entry: F4L3M8_HALH1
LinkDB: F4L3M8_HALH1
Original site: F4L3M8_HALH1 
ID   F4L3M8_HALH1            Unreviewed;       634 AA.
AC   F4L3M8;
DT   28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT   28-JUN-2011, sequence version 1.
DT   24-JAN-2024, entry version 74.
DE   RecName: Full=Membrane protein insertase YidC {ECO:0000256|ARBA:ARBA00015325, ECO:0000256|HAMAP-Rule:MF_01810};
DE   AltName: Full=Foldase YidC {ECO:0000256|ARBA:ARBA00033342, ECO:0000256|HAMAP-Rule:MF_01810};
DE   AltName: Full=Membrane integrase YidC {ECO:0000256|ARBA:ARBA00033245, ECO:0000256|HAMAP-Rule:MF_01810};
DE   AltName: Full=Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810};
GN   Name=yidC {ECO:0000256|HAMAP-Rule:MF_01810};
GN   OrderedLocusNames=Halhy_6156 {ECO:0000313|EMBL:AEE53978.1};
OS   Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O).
OC   Bacteria; Bacteroidota; Saprospiria; Saprospirales; Haliscomenobacteraceae;
OC   Haliscomenobacter.
OX   NCBI_TaxID=760192 {ECO:0000313|EMBL:AEE53978.1, ECO:0000313|Proteomes:UP000008461};
RN   [1] {ECO:0000313|EMBL:AEE53978.1, ECO:0000313|Proteomes:UP000008461}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 27775 / DSM 1100 / LMG 10767 / O
RC   {ECO:0000313|Proteomes:UP000008461};
RX   PubMed=21886862; DOI=10.4056/sigs.1964579;
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Daligault H., Lapidus A., Zeytun A., Nolan M., Lucas S., Del Rio T.G.,
RA   Tice H., Cheng J.F., Tapia R., Han C., Goodwin L., Pitluck S., Liolios K.,
RA   Pagani I., Ivanova N., Huntemann M., Mavromatis K., Mikhailova N., Pati A.,
RA   Chen A., Palaniappan K., Land M., Hauser L., Brambilla E.M., Rohde M.,
RA   Verbarg S., Goker M., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA   Kyrpides N.C., Klenk H.P., Woyke T.;
RT   "Complete genome sequence of Haliscomenobacter hydrossis type strain (O).";
RL   Stand. Genomic Sci. 4:352-360(2011).
RN   [2]
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=DSM 1100;
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Han J., Lapidus A., Bruce D., Goodwin L., Pitluck S., Peters L.,
RA   Kyrpides N., Mavromatis K., Ivanova N., Ovchinnikova G., Pagani I.,
RA   Daligault H., Detter J.C., Han C., Land M., Hauser L., Markowitz V.,
RA   Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Verbarg S., Frueling A.,
RA   Brambilla E., Klenk H.-P., Eisen J.A.;
RT   "Complete sequence of chromosome of Haliscomenobacter hydrossis DSM 1100.";
RL   Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Required for the insertion and/or proper folding and/or
CC       complex formation of integral membrane proteins into the membrane.
CC       Involved in integration of membrane proteins that insert both
CC       dependently and independently of the Sec translocase complex, as well
CC       as at least some lipoproteins. Aids folding of multispanning membrane
CC       proteins. {ECO:0000256|HAMAP-Rule:MF_01810}.
CC   -!- SUBUNIT: Interacts with the Sec translocase complex via SecD.
CC       Specifically interacts with transmembrane segments of nascent integral
CC       membrane proteins during membrane integration. {ECO:0000256|HAMAP-
CC       Rule:MF_01810}.
CC   -!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000256|HAMAP-
CC       Rule:MF_01810}; Multi-pass membrane protein {ECO:0000256|HAMAP-
CC       Rule:MF_01810}. Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-pass
CC       membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC   -!- SIMILARITY: Belongs to the OXA1/ALB3/YidC family. Type 1 subfamily.
CC       {ECO:0000256|ARBA:ARBA00010527, ECO:0000256|HAMAP-Rule:MF_01810}.
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DR   EMBL; CP002691; AEE53978.1; -; Genomic_DNA.
DR   RefSeq; WP_013768500.1; NC_015510.1.
DR   AlphaFoldDB; F4L3M8; -.
DR   STRING; 760192.Halhy_6156; -.
DR   GeneID; 78195740; -.
DR   KEGG; hhy:Halhy_6156; -.
DR   eggNOG; COG0706; Bacteria.
DR   HOGENOM; CLU_016535_2_0_10; -.
DR   OMA; WGIFGWI; -.
DR   OrthoDB; 9780552at2; -.
DR   Proteomes; UP000008461; Chromosome.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0032977; F:membrane insertase activity; IEA:InterPro.
DR   GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR   CDD; cd20070; 5TM_YidC_Alb3; 1.
DR   CDD; cd19961; EcYidC-like_peri; 1.
DR   Gene3D; 2.70.98.90; -; 1.
DR   HAMAP; MF_01810; YidC_type1; 1.
DR   InterPro; IPR019998; Membr_insert_YidC.
DR   InterPro; IPR028053; Membr_insert_YidC_N.
DR   InterPro; IPR001708; YidC/ALB3/OXA1/COX18.
DR   InterPro; IPR028055; YidC/Oxa/ALB_C.
DR   InterPro; IPR047196; YidC_ALB_C.
DR   InterPro; IPR038221; YidC_periplasmic_sf.
DR   NCBIfam; TIGR03593; yidC_nterm; 1.
DR   NCBIfam; TIGR03592; yidC_oxa1_cterm; 1.
DR   PANTHER; PTHR12428:SF65; CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX18, MITOCHONDRIAL; 1.
DR   PANTHER; PTHR12428; OXA1; 1.
DR   Pfam; PF02096; 60KD_IMP; 1.
DR   Pfam; PF14849; YidC_periplas; 1.
DR   PRINTS; PR00701; 60KDINNERMP.
PE   3: Inferred from homology;
KW   Cell inner membrane {ECO:0000256|HAMAP-Rule:MF_01810};
KW   Cell membrane {ECO:0000256|ARBA:ARBA00022475, ECO:0000256|HAMAP-
KW   Rule:MF_01810};
KW   Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|HAMAP-Rule:MF_01810};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|HAMAP-Rule:MF_01810};
KW   Protein transport {ECO:0000256|ARBA:ARBA00022927, ECO:0000256|HAMAP-
KW   Rule:MF_01810}; Reference proteome {ECO:0000313|Proteomes:UP000008461};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|HAMAP-
KW   Rule:MF_01810};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989, ECO:0000256|HAMAP-
KW   Rule:MF_01810};
KW   Transport {ECO:0000256|ARBA:ARBA00022448, ECO:0000256|HAMAP-Rule:MF_01810}.
FT   TRANSMEM        7..24
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_01810"
FT   TRANSMEM        375..398
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_01810"
FT   TRANSMEM        444..465
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_01810"
FT   TRANSMEM        506..524
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_01810"
FT   TRANSMEM        536..553
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_01810"
FT   DOMAIN          96..373
FT                   /note="Membrane insertase YidC N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF14849"
FT   DOMAIN          384..577
FT                   /note="Membrane insertase YidC/Oxa/ALB C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF02096"
FT   REGION          615..634
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   634 AA;  73144 MW;  43C28DE1D001F948 CRC64;
     MDRNNIIGIA LIFILFLAWQ YFLAPSKTQI AAQQRAQDSI ARVERLRDSL AIVKKQEARE
     KIKAAAEVPD SVRTQMLGGQ YGPFANAAVG KEETTVLEND LIKVTFSNKG GKIQDVLVKK
     YFKMVQGEDR KDRKIPLHLL DDVKNRFEYT LPVKGLRNGV NTADLYFEVN NTGNSVTFRA
     DAGNGQYFAQ TYSLPSNTYK LDYRLEFEGM DQVFEASAKN ITLKWVNYLD KIEKATQYER
     QYSSLNFKAI DENSGRCSPT REYSEKDAEG APIQWVANTN QFFNSSLLSE KGFTSAKMAS
     KNLPEENEDL KELKSEIQVP FKGESSEQFA MHFYIGPNEF DRLHKMGYSL SDVVPFGQNI
     MGTINRWVIR PLFSFLTWLI SSKGIVILML TFMVKLLLFP LTYRMIYSQS KMTALKPEIE
     RLKERYGDDQ QKVQMETMSM YREFGVNPLG ACFPMLLQLP IWFALYRFFP ASIEFRQASF
     LWATDLSSYD EFFQLPFNIP FGFGEHISLF ALLWVLSTLL YTWYNSKNMD FSANPSMLYM
     QYIMPVLFMG FFNSSASGLS AYMLFSNLLN IGQTLATKYF LIDEKKLKLK MDDYRKKPKK
     KAGFGARMET MLKEQQRLAE EKSKQAKQPQ PKRK
//
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