ID F4P8B1_BATDJ Unreviewed; 702 AA.
AC F4P8B1;
DT 28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2011, sequence version 1.
DT 24-JAN-2024, entry version 58.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EGF78775.1};
GN ORFNames=BATDEDRAFT_90519 {ECO:0000313|EMBL:EGF78775.1};
OS Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) (Frog chytrid
OS fungus).
OC Eukaryota; Fungi; Fungi incertae sedis; Chytridiomycota;
OC Chytridiomycota incertae sedis; Chytridiomycetes; Rhizophydiales;
OC Rhizophydiales incertae sedis; Batrachochytrium.
OX NCBI_TaxID=684364 {ECO:0000313|EMBL:EGF78775.1, ECO:0000313|Proteomes:UP000007241};
RN [1] {ECO:0000313|EMBL:EGF78775.1, ECO:0000313|Proteomes:UP000007241}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JAM81 / FGSC 10211 {ECO:0000313|Proteomes:UP000007241};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Kuo A., Salamov A., Schmutz J., Lucas S., Pitluck S., Rosenblum E.,
RA Stajich J., Eisen M., Grigoriev I.V.;
RT "The draft genome of Batrachochytrium dendrobatidis.";
RL Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Involved in pre-mRNA splicing and cell cycle progression.
CC Required for the spliceosome assembly and initiation of the DNA
CC replication. {ECO:0000256|ARBA:ARBA00037040}.
CC -!- SUBUNIT: Associated with the spliceosome.
CC {ECO:0000256|ARBA:ARBA00011524}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the crooked-neck family.
CC {ECO:0000256|ARBA:ARBA00008644}.
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DR EMBL; GL882888; EGF78775.1; -; Genomic_DNA.
DR RefSeq; XP_006680968.1; XM_006680905.1.
DR AlphaFoldDB; F4P8B1; -.
DR STRING; 684364.F4P8B1; -.
DR GeneID; 18243907; -.
DR HOGENOM; CLU_011554_1_0_1; -.
DR InParanoid; F4P8B1; -.
DR OMA; HIKVWIS; -.
DR OrthoDB; 5479069at2759; -.
DR Proteomes; UP000007241; Unassembled WGS sequence.
DR GO; GO:0071014; C:post-mRNA release spliceosomal complex; IBA:GO_Central.
DR GO; GO:0000974; C:Prp19 complex; IBA:GO_Central.
DR GO; GO:0071007; C:U2-type catalytic step 2 spliceosome; IBA:GO_Central.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IBA:GO_Central.
DR GO; GO:0000245; P:spliceosomal complex assembly; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR003107; HAT.
DR InterPro; IPR045075; Syf1-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR11246:SF3; CROOKED NECK-LIKE PROTEIN 1; 1.
DR PANTHER; PTHR11246; PRE-MRNA SPLICING FACTOR; 1.
DR Pfam; PF02184; HAT; 1.
DR Pfam; PF13428; TPR_14; 1.
DR SMART; SM00386; HAT; 14.
DR SUPFAM; SSF48452; TPR-like; 2.
DR PROSITE; PS50005; TPR; 1.
PE 3: Inferred from homology;
KW mRNA processing {ECO:0000256|ARBA:ARBA00023187};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Reference proteome {ECO:0000313|Proteomes:UP000007241};
KW TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT REPEAT 71..104
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REGION 665..702
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 669..684
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 685..702
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 702 AA; 83888 MW; 3F6E0302F94CA63B CRC64;
MDRQRTSKVK NKNAAAVQIT AEQLLKEAES FREKPAVQPV QKIADKEELD DYRMGKRKGF
EDAVRRNRTA VGAWLKYAAW EESQDELERA RSVYERSLDF EPRNQTLWLK YAEMEMKHRN
INRARNVLDR VVAILPRVDL FWYKYTYMEE LLDNVAGARQ IFERWMEWEP SEEAWMAFVK
FEKRYHEVDR ARRIFQRFVQ LMPQPKNWIK WAKFEEIGGN VDMAREIYEQ CMSTLGDAFI
DQNMYISFAK FETRLKEIER ARMIFKFALD KLPEGQKENL YNAYTQFEKQ YGGKDGIEHV
VMSKRRIKYE EELAETPHNY DVWFDYIRLE ESTDRHEKIR EVYERAIAQV PPAAEKRYWR
RYIYLWLFYA VWEETVANDV ERARQVYINC IKLIPHKQFT FSKVWVMYSH FLIRLLDLTQ
ARKVLGQAIG MCPKERLFKS YIELELSLRD FDRVRILYQK YLEWNPVNCY GWIKFAELES
MLGDEDRARA IFEAAIAQPA LDMPEILWKS YIDFEIKETE WKNARELYHR LLQLTDHVKV
HISFANFEMS ALDNGDTQAA IAQSRSRFAL SNTHLRKTST KEERVLLLEA WRDFERLHGT
PETLKSVVAK LPRPVKKRRR VEDEHGAPAG WDEYYDYIFP DDEDEKPNFK LLALAHQWKM
KMAAMGDDND DTESDDEDDV QDKNGDVSEP DTSDHENNSN HK
//