ID F5ARE9_AERSA Unreviewed; 217 AA.
AC F5ARE9;
DT 28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2011, sequence version 1.
DT 03-MAY-2023, entry version 30.
DE SubName: Full=RNA polymerase sigma-70 factor {ECO:0000313|EMBL:AEE38909.1, ECO:0000313|EMBL:AHI50287.1};
DE Flags: Fragment;
GN Name=rpoD {ECO:0000313|EMBL:AEE38909.1};
OS Aeromonas salmonicida.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Aeromonadales;
OC Aeromonadaceae; Aeromonas.
OX NCBI_TaxID=645 {ECO:0000313|EMBL:AEE38909.1};
RN [1] {ECO:0000313|EMBL:AEE38909.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=MDC 148 {ECO:0000313|EMBL:AEE38911.1}, MDC 25
RC {ECO:0000313|EMBL:AEE38910.1}, MDC 26 {ECO:0000313|EMBL:AEE38912.1},
RC and MDC 44 {ECO:0000313|EMBL:AEE38909.1};
RX PubMed=21353754; DOI=10.1016/j.syapm.2010.11.014;
RA Martinez-Murcia A.J., Monera A., Saavedra M.J., Oncina R.,
RA Lopez-Alvarez M., Lara E., Figueras M.J.;
RT "Multilocus phylogenetic analysis of the genus Aeromonas.";
RL Syst. Appl. Microbiol. 34:189-199(2011).
RN [2] {ECO:0000313|EMBL:AHI50287.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=27013 {ECO:0000313|EMBL:AHI50287.1};
RA Hossain M.J., Sun D., Mcgarey D.J., Wrenn S., Alexander L.M., Martino M.E.,
RA Xing Y., Terhune J.S., Liles M.R.;
RT "Evidence that highly virulent Aeromonas hydrophila isolates of epidemic
RT outbreaks in farmed catfish in the United States originated in Asia.";
RL Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; HQ442845; AEE38909.1; -; Genomic_DNA.
DR EMBL; HQ442846; AEE38910.1; -; Genomic_DNA.
DR EMBL; HQ442847; AEE38911.1; -; Genomic_DNA.
DR EMBL; HQ442848; AEE38912.1; -; Genomic_DNA.
DR EMBL; KF873713; AHI50287.1; -; Genomic_DNA.
DR AlphaFoldDB; F5ARE9; -.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.601.10; RNA Polymerase Primary Sigma Factor; 1.
DR InterPro; IPR007631; RNA_pol_sigma_70_non-ess.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR Pfam; PF04546; Sigma70_ner; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
PE 4: Predicted;
FT DOMAIN 1..213
FT /note="RNA polymerase sigma factor 70 non-essential"
FT /evidence="ECO:0000259|Pfam:PF04546"
FT REGION 29..86
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 50..75
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AEE38909.1"
FT NON_TER 217
FT /evidence="ECO:0000313|EMBL:AEE38909.1"
SQ SEQUENCE 217 AA; 24829 MW; 4CFB6C80B535285A CRC64;
PEAITYLLEQ YDKYEAEQLR LSDIISGFID PNEADDVAPT ATHIGSELGE DDLADEDEDE
DEDDDGDSSD DEGDGGPDPE VAREKFGDLR AQYEVTRLSI QKNGRAHEDT QAAIAQLADV
FRQFRLMPKQ FDRLVNNMRE MMERVRVQER IIMKLCVEQA KMPKKTFVAA FTNNECETAW
FEYQKQAGKA WSPRLLEMDE EVLRSIGKLQ QIEEETG
//
