ID F5CPH6_LACPN Unreviewed; 228 AA.
AC F5CPH6;
DT 28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT 28-JUN-2011, sequence version 1.
DT 13-SEP-2023, entry version 40.
DE SubName: Full=DNA-directed RNA polymerase alpha chain {ECO:0000313|EMBL:AEB52108.1};
DE Flags: Fragment;
GN Name=rpoA {ECO:0000313|EMBL:AEB52108.1};
OS Lactiplantibacillus plantarum (Lactobacillus plantarum).
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
OC Lactiplantibacillus.
OX NCBI_TaxID=1590 {ECO:0000313|EMBL:AEB52108.1};
RN [1] {ECO:0000313|EMBL:AEB52108.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=GIMC25:ZDV-1 {ECO:0000313|EMBL:AEB52108.1};
RA Voronina O.L., Kunda M.S., Lunin V.G., Bondarenko V.M., Shabanova N.A.;
RT "Development of the method of suitable and reliable identification of
RT Lactobacillus species.";
RL Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; JF754660; AEB52108.1; -; Genomic_DNA.
DR AlphaFoldDB; F5CPH6; -.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:InterPro.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR CDD; cd06928; RNAP_alpha_NTD; 1.
DR Gene3D; 2.170.120.12; DNA-directed RNA polymerase, insert domain; 1.
DR Gene3D; 3.30.1360.10; RNA polymerase, RBP11-like subunit; 1.
DR InterPro; IPR011262; DNA-dir_RNA_pol_insert.
DR InterPro; IPR011263; DNA-dir_RNA_pol_RpoA/D/Rpb3.
DR InterPro; IPR011773; DNA-dir_RpoA.
DR InterPro; IPR036603; RBP11-like.
DR InterPro; IPR036643; RNApol_insert_sf.
DR NCBIfam; TIGR02027; rpoA; 1.
DR Pfam; PF01000; RNA_pol_A_bac; 1.
DR Pfam; PF01193; RNA_pol_L; 1.
DR SMART; SM00662; RPOLD; 1.
DR SUPFAM; SSF56553; Insert subdomain of RNA polymerase alpha subunit; 1.
DR SUPFAM; SSF55257; RBP11-like subunits of RNA polymerase; 1.
PE 4: Predicted;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW ECO:0000313|EMBL:AEB52108.1};
KW Transcription {ECO:0000256|ARBA:ARBA00023163}.
FT DOMAIN 1..197
FT /note="DNA-directed RNA polymerase RpoA/D/Rpb3-type"
FT /evidence="ECO:0000259|SMART:SM00662"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AEB52108.1"
FT NON_TER 228
FT /evidence="ECO:0000313|EMBL:AEB52108.1"
SQ SEQUENCE 228 AA; 24931 MW; 6FC28B57093B40AB CRC64;
GTTLGNSLRR ILLSSLPGAA VTSIQIDGVL HEFSTIEGVT EDVTAIILNV KKIALKLESD
ETKTLEIDVK GPANVTAGDI IGDADVEVLN PDLPICTVAD GAHFHMRMTA NTGRGYVSAE
DNKHREDDMP IGVLAVDSLY SPIERVNYQV ENTRVGQRDD FDKLTLDVWT NGSITPSEAI
SLSAKILTDH LSIFVNLTDE AKNTDVMVEK EETHKEKMLE MTIEELDL
//
