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Database: UniProt
Entry: F5CPH9_LACPN
LinkDB: F5CPH9_LACPN
Original site: F5CPH9_LACPN 
ID   F5CPH9_LACPN            Unreviewed;       269 AA.
AC   F5CPH9;
DT   28-JUN-2011, integrated into UniProtKB/TrEMBL.
DT   28-JUN-2011, sequence version 1.
DT   13-SEP-2023, entry version 43.
DE   RecName: Full=DNA-directed RNA polymerase subunit alpha {ECO:0000256|ARBA:ARBA00015972};
DE            EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418};
DE   AltName: Full=RNA polymerase subunit alpha {ECO:0000256|ARBA:ARBA00033070};
DE   AltName: Full=Transcriptase subunit alpha {ECO:0000256|ARBA:ARBA00032524};
DE   Flags: Fragment;
GN   Name=rpoA {ECO:0000313|EMBL:AEB52111.1};
OS   Lactiplantibacillus plantarum (Lactobacillus plantarum).
OC   Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
OC   Lactiplantibacillus.
OX   NCBI_TaxID=1590 {ECO:0000313|EMBL:AEB52111.1};
RN   [1] {ECO:0000313|EMBL:AEB52111.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=GIMC28:SV-20 {ECO:0000313|EMBL:AEB52111.1};
RA   Voronina O.L., Kunda M.S., Lunin V.G., Bondarenko V.M., Shabanova N.A.;
RT   "Development of the method of suitable and reliable identification of
RT   Lactobacillus species.";
RL   Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC         RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC         COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC         EC=2.7.7.6; Evidence={ECO:0000256|ARBA:ARBA00024550};
CC   -!- SIMILARITY: Belongs to the RNA polymerase alpha chain family.
CC       {ECO:0000256|ARBA:ARBA00007123}.
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DR   EMBL; JF754663; AEB52111.1; -; Genomic_DNA.
DR   AlphaFoldDB; F5CPH9; -.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProt.
DR   GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR   GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR   GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR   CDD; cd06928; RNAP_alpha_NTD; 1.
DR   Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR   Gene3D; 2.170.120.12; DNA-directed RNA polymerase, insert domain; 1.
DR   Gene3D; 3.30.1360.10; RNA polymerase, RBP11-like subunit; 1.
DR   HAMAP; MF_00059; RNApol_bact_RpoA; 1.
DR   InterPro; IPR011262; DNA-dir_RNA_pol_insert.
DR   InterPro; IPR011263; DNA-dir_RNA_pol_RpoA/D/Rpb3.
DR   InterPro; IPR011773; DNA-dir_RpoA.
DR   InterPro; IPR036603; RBP11-like.
DR   InterPro; IPR011260; RNAP_asu_C.
DR   InterPro; IPR036643; RNApol_insert_sf.
DR   NCBIfam; TIGR02027; rpoA; 1.
DR   Pfam; PF01000; RNA_pol_A_bac; 1.
DR   Pfam; PF03118; RNA_pol_A_CTD; 1.
DR   Pfam; PF01193; RNA_pol_L; 1.
DR   SMART; SM00662; RPOLD; 1.
DR   SUPFAM; SSF47789; C-terminal domain of RNA polymerase alpha subunit; 1.
DR   SUPFAM; SSF56553; Insert subdomain of RNA polymerase alpha subunit; 1.
DR   SUPFAM; SSF55257; RBP11-like subunits of RNA polymerase; 1.
PE   3: Inferred from homology;
KW   DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW   ECO:0000313|EMBL:AEB52111.1};
KW   Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT   DOMAIN          5..214
FT                   /note="DNA-directed RNA polymerase RpoA/D/Rpb3-type"
FT                   /evidence="ECO:0000259|SMART:SM00662"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:AEB52111.1"
FT   NON_TER         269
FT                   /evidence="ECO:0000313|EMBL:AEB52111.1"
SQ   SEQUENCE   269 AA;  29649 MW;  497FAC92704D7654 CRC64;
     ENDNYGKFVV EPLERGYGTT LGNSLRRILL SSLPGAAVTS IQIDGVLHEF STIEGVTEDV
     TAIILNVKKI ALKLESDETK TLEIDVKGPA NVTAGDIIGD ADVEVLNPDL PICTVADGAH
     FHMRMTANTG RGYVSAEDNK HREDDMPIGV LAVDSLYSPI ERVNYQVENT RVGQRDDFDK
     LTLDVWTNGS ITPSEAISLS AKILTDHLSI FVNLTDEAKN TDVMVEKEET HKEKMLEMTI
     EELDLSVRSY NCLKRAGINT VQELTNKTE
//
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