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Database: UniProt
Entry: F5T397_9GAMM
LinkDB: F5T397_9GAMM
Original site: F5T397_9GAMM 
ID   F5T397_9GAMM            Unreviewed;       503 AA.
AC   F5T397;
DT   27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT   27-JUL-2011, sequence version 1.
DT   24-JAN-2024, entry version 40.
DE   SubName: Full=Radical SAM domain/B12 binding domain protein {ECO:0000313|EMBL:EGL53589.1};
GN   ORFNames=MAMP_01348 {ECO:0000313|EMBL:EGL53589.1};
OS   Methylophaga aminisulfidivorans MP.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Thiotrichales;
OC   Piscirickettsiaceae; Methylophaga.
OX   NCBI_TaxID=1026882 {ECO:0000313|EMBL:EGL53589.1, ECO:0000313|Proteomes:UP000003544};
RN   [1] {ECO:0000313|EMBL:EGL53589.1, ECO:0000313|Proteomes:UP000003544}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=MP(T) {ECO:0000313|Proteomes:UP000003544};
RX   PubMed=21685284; DOI=10.1128/JB.05403-11;
RA   Han G.H., Kim W., Chun J., Kim S.W.;
RT   "Draft genome sequence of Methylophaga aminisulfidivorans MP T.";
RL   J. Bacteriol. 193:4265-4265(2011).
CC   -!- COFACTOR:
CC       Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883;
CC         Evidence={ECO:0000256|ARBA:ARBA00001966};
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EGL53589.1}.
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DR   EMBL; AFIG01000003; EGL53589.1; -; Genomic_DNA.
DR   RefSeq; WP_007146839.1; NZ_AFIG01000003.1.
DR   AlphaFoldDB; F5T397; -.
DR   STRING; 1026882.MAMP_01348; -.
DR   eggNOG; COG1032; Bacteria.
DR   OrthoDB; 9801424at2; -.
DR   Proteomes; UP000003544; Unassembled WGS sequence.
DR   GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR   GO; GO:0031419; F:cobalamin binding; IEA:InterPro.
DR   GO; GO:0051536; F:iron-sulfur cluster binding; IEA:InterPro.
DR   GO; GO:0046872; F:metal ion binding; IEA:InterPro.
DR   CDD; cd01335; Radical_SAM; 1.
DR   CDD; cd02068; radical_SAM_B12_BD; 1.
DR   Gene3D; 3.40.50.280; Cobalamin-binding domain; 1.
DR   Gene3D; 3.80.30.20; tm_1862 like domain; 1.
DR   InterPro; IPR006158; Cobalamin-bd.
DR   InterPro; IPR036724; Cobalamin-bd_sf.
DR   InterPro; IPR025288; DUF4080.
DR   InterPro; IPR006638; Elp3/MiaA/NifB-like_rSAM.
DR   InterPro; IPR007197; rSAM.
DR   InterPro; IPR023404; rSAM_horseshoe.
DR   PANTHER; PTHR43409; ANAEROBIC MAGNESIUM-PROTOPORPHYRIN IX MONOMETHYL ESTER CYCLASE-RELATED; 1.
DR   PANTHER; PTHR43409:SF7; METHYLTHIOTRANSFERASE MJ0865-RELATED; 1.
DR   Pfam; PF02310; B12-binding; 1.
DR   Pfam; PF13311; DUF4080; 1.
DR   Pfam; PF04055; Radical_SAM; 1.
DR   SFLD; SFLDG01082; B12-binding_domain_containing; 1.
DR   SFLD; SFLDS00029; Radical_SAM; 1.
DR   SMART; SM00729; Elp3; 1.
DR   SUPFAM; SSF52242; Cobalamin (vitamin B12)-binding domain; 1.
DR   SUPFAM; SSF102114; Radical SAM enzymes; 1.
DR   PROSITE; PS51332; B12_BINDING; 1.
DR   PROSITE; PS51918; RADICAL_SAM; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000003544}.
FT   DOMAIN          5..137
FT                   /note="B12-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS51332"
FT   DOMAIN          162..392
FT                   /note="Radical SAM core"
FT                   /evidence="ECO:0000259|PROSITE:PS51918"
SQ   SEQUENCE   503 AA;  57765 MW;  2735C709290471B8 CRC64;
     MAQQVDILLT TLNARYMHSA FGLRYLLANM EELAFKTKML EFTIQEQTLN IAEQLLQYQP
     KIIGFSVYIW NIREISDIVT VIKQISPDTV IVLGGPEVGH YPDVPDICAL ADFVISGPGE
     KSFRELCSQI LDKARPETKY IDGIATDLAE LQLPYHLYNE EDIRNRLIYV EASRGCPFKC
     EFCLSALDKT ATAFPLESFL AEMDALWQRG VRNFKFIDRT FNLKVSTSIR ILEFFLERMT
     DDLYLHFEVV PDNLPDKLKE ALKRFPPNSL QFEIGIQTFD SDIQTLISRK QNNDKTRENI
     RWLRQHTGAH LHTDLIFGLP SDSLDNFAES FNQLVALNPH EIQLGILKRL RGAPLNRHNE
     NFALNYNPQA PYNILSTSSV DFMTMQRVNR FARFWDMIGN SGRFINTLPL ILGDDAFARF
     MLLSDRLFDI SGSTWKIALK RLFELLFVVL TEDLAIDQQT VKDHLKLDYA RAGVKGIPDY
     ENLPSLNKPA KAGVANKRQR YHG
//
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