ID F5T397_9GAMM Unreviewed; 503 AA.
AC F5T397;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 24-JAN-2024, entry version 40.
DE SubName: Full=Radical SAM domain/B12 binding domain protein {ECO:0000313|EMBL:EGL53589.1};
GN ORFNames=MAMP_01348 {ECO:0000313|EMBL:EGL53589.1};
OS Methylophaga aminisulfidivorans MP.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Thiotrichales;
OC Piscirickettsiaceae; Methylophaga.
OX NCBI_TaxID=1026882 {ECO:0000313|EMBL:EGL53589.1, ECO:0000313|Proteomes:UP000003544};
RN [1] {ECO:0000313|EMBL:EGL53589.1, ECO:0000313|Proteomes:UP000003544}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MP(T) {ECO:0000313|Proteomes:UP000003544};
RX PubMed=21685284; DOI=10.1128/JB.05403-11;
RA Han G.H., Kim W., Chun J., Kim S.W.;
RT "Draft genome sequence of Methylophaga aminisulfidivorans MP T.";
RL J. Bacteriol. 193:4265-4265(2011).
CC -!- COFACTOR:
CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883;
CC Evidence={ECO:0000256|ARBA:ARBA00001966};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EGL53589.1}.
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DR EMBL; AFIG01000003; EGL53589.1; -; Genomic_DNA.
DR RefSeq; WP_007146839.1; NZ_AFIG01000003.1.
DR AlphaFoldDB; F5T397; -.
DR STRING; 1026882.MAMP_01348; -.
DR eggNOG; COG1032; Bacteria.
DR OrthoDB; 9801424at2; -.
DR Proteomes; UP000003544; Unassembled WGS sequence.
DR GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR GO; GO:0031419; F:cobalamin binding; IEA:InterPro.
DR GO; GO:0051536; F:iron-sulfur cluster binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:InterPro.
DR CDD; cd01335; Radical_SAM; 1.
DR CDD; cd02068; radical_SAM_B12_BD; 1.
DR Gene3D; 3.40.50.280; Cobalamin-binding domain; 1.
DR Gene3D; 3.80.30.20; tm_1862 like domain; 1.
DR InterPro; IPR006158; Cobalamin-bd.
DR InterPro; IPR036724; Cobalamin-bd_sf.
DR InterPro; IPR025288; DUF4080.
DR InterPro; IPR006638; Elp3/MiaA/NifB-like_rSAM.
DR InterPro; IPR007197; rSAM.
DR InterPro; IPR023404; rSAM_horseshoe.
DR PANTHER; PTHR43409; ANAEROBIC MAGNESIUM-PROTOPORPHYRIN IX MONOMETHYL ESTER CYCLASE-RELATED; 1.
DR PANTHER; PTHR43409:SF7; METHYLTHIOTRANSFERASE MJ0865-RELATED; 1.
DR Pfam; PF02310; B12-binding; 1.
DR Pfam; PF13311; DUF4080; 1.
DR Pfam; PF04055; Radical_SAM; 1.
DR SFLD; SFLDG01082; B12-binding_domain_containing; 1.
DR SFLD; SFLDS00029; Radical_SAM; 1.
DR SMART; SM00729; Elp3; 1.
DR SUPFAM; SSF52242; Cobalamin (vitamin B12)-binding domain; 1.
DR SUPFAM; SSF102114; Radical SAM enzymes; 1.
DR PROSITE; PS51332; B12_BINDING; 1.
DR PROSITE; PS51918; RADICAL_SAM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000003544}.
FT DOMAIN 5..137
FT /note="B12-binding"
FT /evidence="ECO:0000259|PROSITE:PS51332"
FT DOMAIN 162..392
FT /note="Radical SAM core"
FT /evidence="ECO:0000259|PROSITE:PS51918"
SQ SEQUENCE 503 AA; 57765 MW; 2735C709290471B8 CRC64;
MAQQVDILLT TLNARYMHSA FGLRYLLANM EELAFKTKML EFTIQEQTLN IAEQLLQYQP
KIIGFSVYIW NIREISDIVT VIKQISPDTV IVLGGPEVGH YPDVPDICAL ADFVISGPGE
KSFRELCSQI LDKARPETKY IDGIATDLAE LQLPYHLYNE EDIRNRLIYV EASRGCPFKC
EFCLSALDKT ATAFPLESFL AEMDALWQRG VRNFKFIDRT FNLKVSTSIR ILEFFLERMT
DDLYLHFEVV PDNLPDKLKE ALKRFPPNSL QFEIGIQTFD SDIQTLISRK QNNDKTRENI
RWLRQHTGAH LHTDLIFGLP SDSLDNFAES FNQLVALNPH EIQLGILKRL RGAPLNRHNE
NFALNYNPQA PYNILSTSSV DFMTMQRVNR FARFWDMIGN SGRFINTLPL ILGDDAFARF
MLLSDRLFDI SGSTWKIALK RLFELLFVVL TEDLAIDQQT VKDHLKLDYA RAGVKGIPDY
ENLPSLNKPA KAGVANKRQR YHG
//