ID F5Y3W9_RAMTT Unreviewed; 143 AA.
AC F5Y3W9;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 27-MAR-2024, entry version 55.
DE SubName: Full=Candidate transcriptional regulator HpcR (Homoprotocatechuate degradative operon repressor), MarR family {ECO:0000313|EMBL:AEG91247.1};
GN Name=hpcR {ECO:0000313|EMBL:AEG91247.1};
GN OrderedLocusNames=Rta_01830 {ECO:0000313|EMBL:AEG91247.1};
OS Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 /
OS TTB310).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Ramlibacter.
OX NCBI_TaxID=365046 {ECO:0000313|EMBL:AEG91247.1, ECO:0000313|Proteomes:UP000008385};
RN [1] {ECO:0000313|Proteomes:UP000008385}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310
RC {ECO:0000313|Proteomes:UP000008385};
RA Barakat M., Ortet P., De Luca G., Jourlin-Castelli C., Ansaldi M., Py B.,
RA Fichant G., Coutinho P., Voulhoux R., Bastien O., Roy S., Marechal E.,
RA Henrissat B., Quentin Y., Noirot P., Filloux A., Mejean V., DuBow M.,
RA Barras F., Heulin T.;
RT "Genome of the cyst-dividing bacterium Ramlibacter tataouinensis.";
RL Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:AEG91247.1, ECO:0000313|Proteomes:UP000008385}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310
RC {ECO:0000313|Proteomes:UP000008385};
RX PubMed=21912644; DOI=10.1371/journal.pone.0023784;
RA De Luca G., Barakat M., Ortet P., Fochesato S., Jourlin-Castelli C.,
RA Ansaldi M., Py B., Fichant G., Coutinho P.M., Voulhoux R., Bastien O.,
RA Marechal E., Henrissat B., Quentin Y., Noirot P., Filloux A., Mejean V.,
RA Dubow M.S., Barras F., Barbe V., Weissenbach J., Mihalcescu I.,
RA Vermeglio A., Achouak W., Heulin T.;
RT "The Cyst-Dividing Bacterium Ramlibacter tataouinensis TTB310 Genome
RT Reveals a Well-Stocked Toolbox for Adaptation to a Desert Environment.";
RL PLoS ONE 6:E23784-E23784(2011).
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DR EMBL; CP000245; AEG91247.1; -; Genomic_DNA.
DR AlphaFoldDB; F5Y3W9; -.
DR STRING; 365046.Rta_01830; -.
DR KEGG; rta:Rta_01830; -.
DR PATRIC; fig|365046.3.peg.189; -.
DR eggNOG; COG1846; Bacteria.
DR HOGENOM; CLU_083287_8_1_4; -.
DR Proteomes; UP000008385; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0045892; P:negative regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR012712; HpaR/FarR.
DR InterPro; IPR000835; HTH_MarR-typ.
DR InterPro; IPR039422; MarR/SlyA-like.
DR InterPro; IPR023187; Tscrpt_reg_MarR-type_CS.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR NCBIfam; TIGR02337; HpaR; 1.
DR PANTHER; PTHR33164:SF13; 4-HYDROXYPHENYLACETATE CATABOLISM PROTEIN; 1.
DR PANTHER; PTHR33164; TRANSCRIPTIONAL REGULATOR, MARR FAMILY; 1.
DR Pfam; PF12802; MarR_2; 1.
DR SMART; SM00347; HTH_MARR; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS01117; HTH_MARR_1; 1.
DR PROSITE; PS50995; HTH_MARR_2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008385}.
FT DOMAIN 1..118
FT /note="HTH marR-type"
FT /evidence="ECO:0000259|PROSITE:PS50995"
FT REGION 121..143
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 143 AA; 16011 MW; F660CC09E1828B47 CRC64;
MAHNRPRLRE HGLSDQQWRV LRVLGEHGTV ETGRVAREAF ILGPSLTGVL ARMERDGLIR
RERDPADQRR TVVEATAKGR KLVDKLSHAV EAHYQWMEAT LGKAKLQQLY RLLDELIELE
QPGAGPGRPS RRNGAAPQAE APA
//
